Evidence map›Paper›PMID 19116209›Full record

ArticleMolecular & cellular proteomics : MCP2009

MMP-9 sheds the beta2 integrin subunit (CD18) from macrophages.

Tomás Vaisar, Sean Y Kassim, Ivan G Gomez, Pattie S Green, Sara Hargarten, Peter J Gough, William C Parks, Carole L Wilson, Elaine W Raines, Jay W Heinecke

Abstract read
In one paragraph

Article in Molecular & cellular proteomics : MCP, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 49 papers.

0numbers the graph read from it
0cells of the map it votes in
49citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

49 citing papers in PubMed.

  1. Trial
  2. Review
  3. Article
  4. Article
  5. Article
  6. Novel Matrix Metalloproteinase-9 (MMP-9) Inhibitors in Cancer Treatment.International journal of molecular sciences · 2023
    Review
  7. Article
  8. Review
  9. Review
  10. Article
  11. Article
  12. Article
  13. Review
  14. Review
  15. Innate Immunity Effector Cells as Inflammatory Drivers of Cardiac Fibrosis.International journal of molecular sciences · 2020
    Review
  16. Review
  17. Matrix Metalloproteases as Influencers of the Cells' Social Media.International journal of molecular sciences · 2019
    Review
  18. Matrix metalloproteinases in the CNS: interferons get nervous.Cellular and molecular life sciences : CMLS · 2019
    Review
  19. Matrix metalloproteinases in emphysema.Matrix biology : journal of the International Society for Matrix Biology · 2018
    Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Tomás VaisarDepartment of Medicine, School of Medicine, University of Washington, Seattle, Washington 98195, USA.
Sean Y Kassim
Ivan G Gomez
Pattie S Green
Sara Hargarten
Peter J Gough
William C Parks
Carole L Wilson
Elaine W Raines
Jay W Heinecke

Funding

Vector and Transgenic Mouse CoreP30DK017047 · NIDDK · UNIVERSITY OF WASHINGTON · PI Sakeneh Zraika · 1986 to 2026
$41.4M
VLA-4 and VCAM-1 in Advanced AtherosclerosisP01HL018645 · NHLBI · UNIVERSITY OF WASHINGTON · PI CHAIT, ALAN · 1985 to 2010
$23.9M
SCCOR in Translational Research in Acute Lung InjuryP50HL073996 · NHLBI · UNIVERSITY OF WASHINGTON · PI MARTIN, THOMAS R · 2003 to 2007
$15.7M
Serum Amyloid and Inflammation in AtherogenesisP01HL030086 · NHLBI · UNIVERSITY OF WASHINGTON · PI HEINECKE, JAY W · 1985 to 2009
$14.7M
REVERSE CHOLESTEROL TRANSPORT IN DIABETESP01DK002456 · NIDDK · UNIVERSITY OF WASHINGTON · PI CHAIT, ALAN · 1986 to 2007
$10.2M
Calcification and Vascular Cell DifferentiationR01HL081785 · NHLBI · UNIVERSITY OF WASHINGTON · PI GIACHELLI, CECILIA M · 2005 to 2017
$3.7M
MMP-9 AS A PROINFLAMMATORY REGULATOR IN ATHEROGENESISR01HL081795 · NHLBI · UNIVERSITY OF WASHINGTON · PI RAINES, ELAINE W · 2005 to 2010
$2.6M
Macrophage-Derived Oxidants in AtherogenesisR01HL078527 · NHLBI · UNIVERSITY OF WASHINGTON · PI HEINECKE, JAY W · 2005 to 2008
$1.5M
NHLBI PROTEOMICS INITIATIVE-268028179N01HV028179 · HV · INSTITUTE FOR SYSTEMS BIOLOGY · 2002 to 2002
–
NHLBI NIH HHS N01 HV028179NHLBI NIH HHS P01 HL018645NHLBI NIH HHS P01 HL030086NHLBI NIH HHS P50 HL073996NHLBI NIH HHS R01 HL078527NHLBI NIH HHS R01 HL081785NHLBI NIH HHS R01 HL081795NIDDK NIH HHS DK002456NIDDK NIH HHS P01 DK002456NIDDK NIH HHS P30 DK017047NIEHS NIH HHS P30 ES07083
6 · The paper itself

Abstract

Activated macrophages are essential effectors of immunity and a rich source of matrix metalloproteinase-9 (MMP-9; gelatinase B). To search for cellular substrates of the enzyme, we subjected wild-type macrophages and macrophages expressing an autoactivating form of pro-MMP-9 (M9A macrophages) to proteomics analysis. Two-dimensional liquid chromatography together with tandem mass spectrometry identified 467 proteins in medium conditioned by M9A and/or wild-type macrophages. Subtractive proteomics identified 18 candidate MMP-9 substrates. Biochemical studies confirmed that two transmembrane proteins, beta(2) integrin subunit (CD18) and amyloid protein precursor (APP), were enriched in the medium of M9A macrophages. To identify potential cleavage sites, we synthesized an overlapping library of peptides that spanned 60 residues of the ectodomain and transmembrane domain of beta(2) integrin. Active MMP-9 cleaved a single peptide, ECVKGPNVAAIVGGT, at residues corresponding to Ala(705) and Ile(706) of the beta(2) integrin. Peptides corresponding to this cleavage site were detected by tandem mass spectrometric analysis only in medium from M9A macrophages, strongly supporting the proposal that beta(2) integrin is shed by autoactivating MMP-9. Our observations indicate that subtractive proteomics in concert with peptide substrate mapping is a powerful approach for identifying proteolytic substrates and suggest that MMP-9 plays previously unsuspected roles in the regulation and shedding of beta(2) integrin.

Indexed as

Amino Acid SequenceAmyloid beta-Protein PrecursorAnimalsCD18 AntigensCell ExtractsCell LineChromatography, LiquidCulture Media, ConditionedEnzyme ActivationMacrophagesMass SpectrometryMatrix Metalloproteinase 9Membrane ProteinsMiceMolecular Sequence DataPeptidesAmyloid beta-Protein PrecursorCD18 AntigensCell ExtractsCulture Media, ConditionedMatrix Metalloproteinase 9Membrane ProteinsPeptidesProtein Subunits

Identifiers

PMID19116209
PMCPMC2689762

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.