Evidence map›Paper›PMID 19115045›Full record

ArticlePlant molecular biology2009

The Arabidopsis DNA mismatch repair gene PMS1 restricts somatic recombination between homeologous sequences.

Liangliang Li, Eric Dion, Gabriel Richard, Olivier Domingue, Martine Jean, François J Belzile

Abstract read
PubMed Publisher
In one paragraph

Article in Plant molecular biology, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
1.0field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 25 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Effects ofFrontiers in plant science · 2020
    Article
  5. Review
  6. Article
  7. Article
  8. Article
  9. Review
  10. Effects of suppressing the DNA mismatch repair system on homeologous recombination in tomato.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2011
    Article
  11. Article
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Liangliang LiDépartement de phytologie, Université Laval, 1243 Pavillon C.-E. Marchand, 1030, avenue de la Médecine, Quebec, QC G1V 0A6, Canada.
Eric Dion
Gabriel Richard
Olivier Domingue
Martine Jean
François J Belzile
Université Laval · CA

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The eukaryotic DNA mismatch repair (MMR) system contributes to maintaining the fidelity of genetic information by correcting replication errors and preventing illegitimate recombination events. This study aimed to examine the function(s) of the Arabidopsis thaliana PMS1 gene (AtPMS1), one of three homologs of the bacterial MutL gene in plants. Two independent mutant alleles (Atpms1-1 and Atpms1-2) were obtained and one of these (Atpms1-1) was studied in detail. The mutant exhibited a reduction in seed set and a bias against the transmission of the mutant allele. Somatic recombination, both homologous and homeologous, was examined using a set of reporter constructs. Homologous recombination remained unchanged in the mutant while homeologous recombination was between 1.7- and 4.8-fold higher than in the wild type. This increase in homeologous recombination frequency was not correlated with the degree of sequence divergence. In RNAi lines, a range of increases in homeologous recombination were observed with two lines showing a 3.3-fold and a 3.6-fold increase. These results indicate that the AtPMS1 gene contributes to an antirecombination activity aimed at restricting recombination between diverged sequences.

Indexed as

ArabidopsisArabidopsis ProteinsBase SequenceCrosses, GeneticDNA, BacterialDNA RepairFertilityGene Expression Regulation, PlantGene FrequencyGenotypeMutagenesis, InsertionalMutationMutL ProteinsPlants, Genetically ModifiedRecombination, GeneticReverse Transcriptase Polymerase Chain ReactionArabidopsis ProteinsDNA, BacterialMutL ProteinsPMS1 protein, ArabidopsisT-DNA

Identifiers

PMID19115045
OpenAlexW2051130045

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.