Evidence map›Paper›PMID 19114491›Full record

ArticleJournal of bacteriology2009

Role of conjugative elements in the evolution of the multidrug-resistant pandemic clone Streptococcus pneumoniaeSpain23F ST81.

Nicholas J Croucher, Danielle Walker, Patricia Romero, Nicola Lennard, Gavin K Paterson, Nathalie C Bason, Andrea M Mitchell, Michael A Quail, Peter W Andrew, Julian Parkhill and 2 more

Abstract read
In one paragraph

Article in Journal of bacteriology, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 121 papers.

0numbers the graph read from it
0cells of the map it votes in
121citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

121 citing papers in PubMed.

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  20. Prevalence and resistance characteristics of multidrug-resistantFrontiers in cellular and infection microbiology · 2023
    Article

61 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Nicholas J CroucherWellcome Trust Sanger Institute, Hinxton, Cambridge, Cambridgeshire, United Kingdom. nc3@sanger.ac.uk
Danielle Walker
Patricia Romero
Nicola Lennard
Gavin K Paterson
Nathalie C Bason
Andrea M Mitchell
Michael A Quail
Peter W Andrew
Julian Parkhill
Stephen D Bentley
Tim J Mitchell

Funding

Biotechnology and Biological Sciences Research CouncilMedical Research CouncilWellcome Trust
6 · The paper itself

Abstract

Streptococcus pneumoniae is a human commensal and pathogen able to cause a variety of diseases that annually result in over a million deaths worldwide. The S. pneumoniae(Spain23F) sequence type 81 lineage was among the first recognized pandemic clones and was responsible for almost 40% of penicillin-resistant pneumococcal infections in the United States in the late 1990s. Analysis of the chromosome sequence of a representative strain, and comparison with other available genomes, indicates roles for integrative and conjugative elements in the evolution of pneumococci and, more particularly, the emergence of the multidrug-resistant Spain 23F ST81 lineage. A number of recently acquired loci within the chromosome appear to encode proteins involved in the production of, or immunity to, antimicrobial compounds, which may contribute to the proficiency of this strain at nasopharyngeal colonization. However, further sequencing of other pandemic clones will be required to establish whether there are any general attributes shared by these strains that are responsible for their international success.

Indexed as

Conjugation, GeneticDisease OutbreaksDNA Transposable ElementsDrug Resistance, Multiple, BacterialEvolution, MolecularPneumococcal InfectionsAnti-Bacterial AgentsElementsGenome, BacterialGenomic IslandsHumansMicrobial Sensitivity TestsMolecular Sequence DataProphagesSequence Analysis, DNASerotypingAnti-Bacterial AgentsDNA Transposable ElementsElements

Identifiers

PMID19114491
PMCPMC2648205

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.