Evidence map›Paper›PMID 19110480›Full record

ArticleThe Journal of biological chemistry2009

Peroxisome deficiency causes a complex phenotype because of hepatic SREBP/Insig dysregulation associated with endoplasmic reticulum stress.

Werner J Kovacs, Khanichi N Tape, Janis E Shackelford, Thomas M Wikander, Michael J Richards, Steven J Fliesler, Skaidrite K Krisans, Phyllis L Faust

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed
1.9field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed, 66 citations in OpenAlex.

  1. Article
  2. Review
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  7. Article
  8. Review
  9. Review
  10. Article
  11. Review
  12. Review
  13. Article
  14. Article
  15. The peroxisome: an update on mysteries 2.0.Histochemistry and cell biology · 2018
    Review
  16. Review
  17. Article
  18. Article
  19. Article
  20. Hypoxia signaling pathways: modulators of oxygen-related organelles.Frontiers in cell and developmental biology · 2015
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 2 countries.

Werner J KovacsInstitute of Cell Biology, ETH Zürich, CH-8093 Zürich, Switzerland. werner.kovacs@cell.biol.ethz.ch
Khanichi N Tape
Janis E Shackelford
Thomas M Wikander
Michael J Richards
Steven J Fliesler
Skaidrite K Krisans
Phyllis L Faust
Saint Louis University · USColumbia University · USETH Zurich · CHSan Diego State University · US

Funding

ISOPRENOID METABOLISM IN THE RETINAR01EY007361 · NEI · UNIVERSITY OF SOUTH FLORIDA · PI FLIESLER, STEVEN J. · 1988 to 2015
$4.4M
CNS defects in a murine Zellweger syndrome modelR01NS050602 · NINDS · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI FAUST, PHYLLIS L · 2004 to 2007
$1.9M
NOVEL GENES OF THE MEVALONATE PATHWAYR01DK058040 · NIDDK · SAN DIEGO STATE UNIVERSITY · PI KRISANS, SKAIDRITE K · 2000 to 2004
$1.8M
Mouse Model for Zellwege SyndromeR01DK058238 · NIDDK · SAN DIEGO STATE UNIVERSITY · PI KRISANS, SKAIDRITE K · 2001 to 2004
$1.1M
CNS DEFECT IN A MURINE ZELLWEGER SYNDROME MODELR01HD036807 · NICHD · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI FAUST, PHYLLIS L · 1999 to 2002
$792k
NEI NIH HHS EY007361NICHD NIH HHS HD36807NIDDK NIH HHS DK58040NIDDK NIH HHS DK58238NINDS NIH HHS NS050602
6 · The paper itself

Abstract

Regulation of hepatic cholesterol biosynthesis, lipogenesis, and insulin signaling intersect at the transcriptional level by control of SREBP and Insig genes. We previously demonstrated that peroxisome-deficient PEX2-/- mice activate SREBP-2 pathways but are unable to maintain normal cholesterol homeostasis. In this study, we demonstrate that oral bile acid treatment normalized hepatic and plasma cholesterol levels and hepatic cholesterol synthesis in early postnatal PEX2 mutants, but SREBP-2 and its target gene expressions remained increased. SREBP-2 pathway induction was also observed in neonatal and longer surviving PEX2 mutants, where hepatic cholesterol levels were normal. Abnormal expression patterns for SREBP-1c and Insig-2a, and novel regulation of Insig-2b, further demonstrate that peroxisome deficiency widely affects the regulation of related metabolic pathways. We have provided the first demonstration that peroxisome deficiency activates hepatic endoplasmic reticulum (ER) stress pathways, especially the integrated stress response mediated by PERK and ATF4 signaling. Our studies suggest a mechanism whereby ER stress leads to dysregulation of the endogenous sterol response mechanism and concordantly activates oxidative stress pathways. Several metabolic derangements in peroxisome-deficient PEX2-/- liver are likely to trigger ER stress, including perturbed flux of mevalonate metabolites, altered bile acid homeostasis, changes in fatty acid levels and composition, and oxidative stress.

Indexed as

Stress, PhysiologicalActivating Transcription Factor 4AnimalsCholesterolEndoplasmic ReticulumHomeostasisLiverMembrane ProteinsMiceMice, KnockoutPeroxisomal Biogenesis Factor 2PeroxisomesPhenotypeSignal TransductionSterol Regulatory Element Binding Protein 1Sterol Regulatory Element Binding Protein 2Activating Transcription Factor 4Atf4 protein, mouseCholesterolInsig2 protein, mouseMembrane ProteinsPeroxisomal Biogenesis Factor 2PEX2 protein, mouseSrebf1 protein, mouseSrebf2 protein, mouseSterol Regulatory Element Binding Protein 1Sterol Regulatory Element Binding Protein 2

Identifiers

PMID19110480
PMCPMC2652311
OpenAlexW2011571438

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.