Evidence map›Paper›PMID 19107604›Full record

ArticleMolecular biotechnology2009

Full-Length gene enrichment by using an optimized RNA isolation protocol in Bixa orellana recalcitrant tissues.

N L Rodríguez-Avila, J A Narváez-Zapata, M L Aguilar-Espinosa, R Rivera-Madrid

Abstract read
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Article in Molecular biotechnology, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

  1. Gene structure and potential regulation of the lycopene cyclase genes inPhysiology and molecular biology of plants : an international journal of functional plant biology · 2023
    Article
  2. Gene expression profile during seed development ofFrontiers in plant science · 2023
    Article
  3. Gene expression analysis during the fruit development in dehiscent and indehiscentPhysiology and molecular biology of plants : an international journal of functional plant biology · 2022
    Article
  4. IdentifyingFrontiers in plant science · 2022
    Article
  5. Article
  6. Review
  7. Article
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

N L Rodríguez-AvilaCentro de Investigación Científica de Yucatán, 97200, Merida, Yucatan, Mexico. renata@cicy.mx
J A Narváez-Zapata
M L Aguilar-Espinosa
R Rivera-Madrid

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

A reliable protocol is described for isolation of large full-length cDNA from Bixa orellana mature tissues containing large quantities of pigments, phenols, and polysaccharides. This protocol involves the optimization of a commercial RNA extraction protocol in combination with a long distance reverse transcript PCR protocol. The principal advantages of this protocol are its high RNA yield and quality. The resulting RNA is suitable for RNA expression evaluation and production of large, full-length cDNA. This is the first time RNA has been isolated from all mature tissues in the tropical perennial plant B. orellana and has been proved viable for downstream applications, especially important for molecular biology studies on this economically important pigment-producing plant.

Indexed as

BixaceaeCarotenoidsDNA, ComplementaryElectrophoresis, Agar GelFlavonoidsNucleic Acid Amplification TechniquesPhenolsPlant Components, AerialPolyphenolsPolysaccharidesReverse Transcriptase Polymerase Chain ReactionRNA, PlantCarotenoidsDNA, ComplementaryFlavonoidsPhenolsPolyphenolsPolysaccharidesRNA, Plant

Identifiers

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.