Evidence map›Paper›PMID 19105742›Full record

ReviewJournal of proteome research2009

Mass spectrometry based targeted protein quantification: methods and applications.

Sheng Pan, Ruedi Aebersold, Ru Chen, John Rush, David R Goodlett, Martin W McIntosh, Jing Zhang, Teresa A Brentnall

Abstract readReview
In one paragraph

Review in Journal of proteome research, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 132 papers.

0numbers the graph read from it
0cells of the map it votes in
132citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

132 citing papers in PubMed.

  1. Article
  2. Article
  3. Mass Spectrometry for Proteomics-Based Investigation.Advances in experimental medicine and biology · 2026
    Review
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Review
  11. Review
  12. Review
  13. Article
  14. Bioprocess Development and Characterization of aAntibodies (Basel, Switzerland) · 2023
    Article
  15. Article
  16. Article
  17. Review
  18. Review
  19. Review
  20. Review

72 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Sheng PanDepartment of Pathology, University of Washington, Seattle, Washington 98195, USA. span@u.washington.edu
Ruedi Aebersold
Ru Chen
John Rush
David R Goodlett
Martin W McIntosh
Jing Zhang
Teresa A Brentnall

Funding

Pancreatic Cancer Protein Biomarkers for Early DetectionR01CA107209 · NCI · UNIVERSITY OF WASHINGTON · PI BRENTNALL, TERESA A · 2006 to 2010
$2.5M
Proteomic Studies in Parkinson's DiseaseR01ES012703 · NIEHS · UNIVERSITY OF WASHINGTON · PI ZHANG, JING · 2004 to 2008
$1.7M
Biomarkers for Parkinson's Disease (PD) and PD DementiaR01AG025327 · NIA · UNIVERSITY OF WASHINGTON · PI ZHANG, JING · 2004 to 2008
$1.4M
Protein biomarkers for detection of pancreatic cancerK07CA116296 · NCI · UNIVERSITY OF WASHINGTON · PI CHEN, RU · 2007 to 2011
$650k
Detecting Biomarkers in Plasma for Diagnosing Neurodegenerative DiseasesR21NS060252 · NINDS · UNIVERSITY OF WASHINGTON · PI ZHANG, JING · 2007 to 2008
$375k
NHLBI PROTEOMICS INITIATIVE-268028179N01HV028179 · HV · INSTITUTE FOR SYSTEMS BIOLOGY · 2002 to 2002
–
NCI NIH HHS K07 CA116296NCI NIH HHS K07CA116296NCI NIH HHS R01 CA107209NCI NIH HHS R01CA107209NHLBI NIH HHS N01 HV028179NHLBI NIH HHS N01-HV-28179NIA NIH HHS R01 AG025327NIA NIH HHS R01AG025327NIEHS NIH HHS R01 ES012703NIEHS NIH HHS R01ES012703NINDS NIH HHS R21 NS060252NINDS NIH HHS R21NS060252
6 · The paper itself

Abstract

The recent advance in technology for mass spectrometry-based targeted protein quantification has opened new avenues for a broad range of proteomic applications in clinical research. The major breakthroughs are highlighted by the capability of using a "universal" approach to perform quantitative assays for a wide spectrum of proteins with minimum restrictions and the ease of assembling multiplex detections in a single measurement. The quantitative approach relies on the use of synthetic stable isotope labeled peptides or proteins, which precisely mimic their endogenous counterparts and act as internal standards to quantify the corresponding candidate proteins. This report reviews recently developed platform technologies for emerging applications of clinical proteomics and biomarker development.

Indexed as

Amino Acid SequenceBiomarkersComputational BiologyGlycoproteinsMass SpectrometryMolecular Sequence DataPeptidesProteomicsBiomarkersGlycoproteinsPeptides

Identifiers

PMID19105742
PMCPMC2657955

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.