Evidence map›Paper›PMID 19104041›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2009

Filament rigidity causes F-actin depletion from nonbinding surfaces.

Charles I Fisher, Scot C Kuo

Open access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.5field-weighted citation impact, top 35% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 12 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. How cofilin severs an actin filament.Biophysical reviews · 2009
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Charles I FisherDepartment of Biomedical Engineering, Johns Hopkins University, 725 North Wolfe Street, Baltimore, MD 21205, USA.
Scot C Kuo
Johns Hopkins University · US

Funding

Surface-bound Regulation of Actin PolymerizationR01GM059285 · NIGMS · JOHNS HOPKINS UNIVERSITY · PI KUO, SCOT CHARLES · 2000 to 2009
$2.1M
NIGMS NIH HHS R01 GM059285NIGMS NIH HHS R01GM59285
6 · The paper itself

Abstract

Proximity to membranes is required of actin networks for many key cell functions, including mechanics and motility. However, F-actin rigidity should hinder a filament's approach to surfaces. Using confocal microscopy, we monitor the distribution of fluorescent actin near nonadherent glass surfaces. Initially uniform, monomers polymerize to create a depletion zone where F-actin is absent at the surface but increases monotonically with distance from the surface. At its largest, depletion effects can extend >35 microm, comparable with the average, mass-weighted filament length. Increasing the rigidity of actin filaments with phalloidin increases the extent of depletion, whereas shortening filaments by using capping protein reduces it proportionally. In addition, depletion kinetics are faster with higher actin concentrations, consistent with faster polymerization and faster Brownian-ratchet-driven motion. Conversely, the extent of depletion decreases with actin concentration, suggesting that entropy is the thermodynamic driving force. Quantitatively, depletion kinetics and extent match existing actin kinetics, rigidity, and lengths. However, explaining depletion profiles and concentration dependence (power-law of -1) requires modifying the rigid rod model. Within cells, surface depletion should slow membrane-associated F-actin reactions another approximately 10-fold beyond hydrodynamically slowed diffusion of filaments (approximately 10-fold). In addition, surface depletion should cause membranes to bend spontaneously toward filaments. Such depletion principles underlie the thermodynamics of all surface-associated reactions with mechanical structures, ranging from DNA to filaments to networks. For various functions, cells must actively resist the thermodynamics of depletion.

Indexed as

Actin CytoskeletonActinsAnimalsCell MembraneCellsDiffusionGlassKineticsMiceMicroscopy, ConfocalModels, BiologicalPhalloidineThermodynamicsActinsPhalloidine

Identifiers

PMID19104041
PMCPMC2629199
OpenAlexW2110165339

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.