Evidence map›Paper›PMID 19103741›Full record

ArticleMolecular and cellular biology2009

The Ku80 carboxy terminus stimulates joining and artemis-mediated processing of DNA ends.

Eric Weterings, Nicole S Verkaik, Guido Keijzers, Bogdan I Florea, Shih-Ya Wang, Laura G Ortega, Naoya Uematsu, David J Chen, Dik C van Gent

Open access · greenAbstract read
In one paragraph

Article in Molecular and cellular biology, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 38 papers.

0numbers the graph read from it
0cells of the map it votes in
38citing papers in PubMed
2.3field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

38 citing papers in PubMed, 71 citations in OpenAlex.

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  6. Rapid recruitment of p53 to DNA damage sites directs DNA repair choice and integrity.Proceedings of the National Academy of Sciences of the United States of America · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 2 countries.

Eric WeteringsDivision of Molecular Radiation Biology, Department of Radiation Oncology, University of Texas Southwestern Medical Center, Dallas, TX 75390-9187, USA.
Nicole S Verkaik
Guido Keijzers
Bogdan I Florea
Shih-Ya Wang
Laura G Ortega
Naoya Uematsu
David J Chen
Dik C van Gent
Erasmus MC · NLThe University of Texas Southwestern Medical Center · USErasmus University Rotterdam · NL

Funding

Transcription-Coupled & Replication-Associated Excision RepairP01CA092584 · NCI · UNIVERSITY OF CALIF-LAWRENC BERKELEY LAB · PI Gregory L Hura · 2001 to 2026
$89.6M
Roles of DNA PK in DNA Double Strand Break RepairR37CA050519 · NCI · UT SOUTHWESTERN MEDICAL CENTER · PI CHEN, DAVID J · 2003 to 2011
$3.5M
NCI NIH HHS 5-R37-CA050519-16NCI NIH HHS P01 CA092584NCI NIH HHS P01-CA92584NCI NIH HHS R37 CA050519
6 · The paper itself

Abstract

Repair of DNA double-strand breaks (DSBs) is predominantly mediated by nonhomologous end joining (NHEJ) in mammalian cells. NHEJ requires binding of the Ku70-Ku80 heterodimer (Ku70/80) to the DNA ends and subsequent recruitment of the DNA-dependent protein kinase catalytic subunit (DNA-PK(CS)) and the XRCC4/ligase IV complex. Activation of the DNA-PK(CS) serine/threonine kinase requires an interaction with Ku70/80 and is essential for NHEJ-mediated DSB repair. In contrast to previous models, we found that the carboxy terminus of Ku80 is not absolutely required for the recruitment and activation of DNA-PK(CS) at DSBs, although cells that harbored a carboxy-terminal deletion in the Ku80 gene were sensitive to ionizing radiation and showed reduced end-joining capacity. More detailed analysis of this repair defect showed that DNA-PK(CS) autophosphorylation at Thr2647 was diminished, while Ser2056 was phosphorylated to normal levels. This resulted in severely reduced levels of Artemis nuclease activity in vivo and in vitro. We therefore conclude that the Ku80 carboxy terminus is important to support DNA-PK(CS) autophosphorylation at specific sites, which facilitates DNA end processing by the Artemis endonuclease and the subsequent joining reaction.

Indexed as

Sequence DeletionAnimalsAntigens, NuclearCatalytic DomainDNA-Activated Protein KinaseDNA-Binding ProteinsDNA Breaks, Double-StrandedDNA RepairDNA Repair EnzymesEndonucleasesHumansKu AutoantigenNuclear ProteinsPeptide FragmentsPhosphorylationRadiation, IonizingAntigens, NuclearDCLRE1C protein, humanDNA-Activated Protein KinaseDNA-Binding ProteinsDNA Repair EnzymesEndonucleasesKu80 antigen C-terminal peptide (720-732)Ku AutoantigenNuclear ProteinsPeptide FragmentsXRCC4 protein, humanXrcc6 protein, human

Identifiers

PMID19103741
PMCPMC2643835
OpenAlexW2160355541

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.