Evidence map›Paper›PMID 19103292›Full record

ArticleMolecular and cellular neurosciences2009

Identification of neuronal target genes for CCAAT/enhancer binding proteins.

Najla Kfoury, Gregory Kapatos

Open access · greenAbstract read
In one paragraph

Article in Molecular and cellular neurosciences, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
1.5field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 44 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. Review
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. An evolving view of epigenetic complexity in the brain.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2014
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Najla KfouryCenter for Molecular Medicine and Genetics, Wayne State University School of Medicine, Detroit, MI, USA.
Gregory Kapatos
Wayne State University · US

Funding

TETRAHYDROBIOPTERIN BIOSYSTHESIS BY DOPAMINE NEURONSR01NS026081 · NINDS · WAYNE STATE UNIVERSITY · PI KAPATOS, GREGORY · 1987 to 2008
$2.4M
NINDS NIH HHS NS26081NINDS NIH HHS R01 NS026081
6 · The paper itself

Abstract

CCAAT/Enhancer Binding Proteins (C/EBPs) play pivotal roles in the development and plasticity of the nervous system. Identification of the physiological targets of C/EBPs (C/EBP target genes) should therefore provide insight into the underlying biology of these processes. We used unbiased genome-wide mapping to identify 115 C/EBPbeta target genes in PC12 cells that include transcription factors, neurotransmitter receptors, ion channels, protein kinases and synaptic vesicle proteins. C/EBPbeta binding sites were located primarily within introns, suggesting novel regulatory functions, and were associated with binding sites for other developmentally important transcription factors. Experiments using dominant negatives showed C/EBPbeta to repress transcription of a subset of target genes. Target genes in rat brain were subsequently found to preferentially bind C/EBPalpha, beta and delta. Analysis of the hippocampal transcriptome of C/EBPbeta knockout mice revealed dysregulation of a high percentage of transcripts identified as C/EBP target genes. These results support the hypothesis that C/EBPs play non-redundant roles in the brain.

Indexed as

AnimalsBinding SitesBrainCCAAT-Enhancer-Binding ProteinsChromatin ImmunoprecipitationCyclic AMPGene Expression ProfilingGene Expression RegulationGene Regulatory NetworksHumansMiceMice, KnockoutMolecular Sequence DataNeuronsPC12 CellsProtein IsoformsCCAAT-Enhancer-Binding ProteinsCyclic AMPProtein Isoforms

Identifiers

PMID19103292
PMCPMC2703816
OpenAlexW2022807604

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.