Evidence map›Paper›PMID 19102781›Full record

ArticleRetrovirology2008

Human cellular microRNA hsa-miR-29a interferes with viral nef protein expression and HIV-1 replication.

Jasmine K Ahluwalia, Sohrab Zafar Khan, Kartik Soni, Pratima Rawat, Ankit Gupta, Manoj Hariharan, Vinod Scaria, Mukesh Lalwani, Beena Pillai, Debashis Mitra and 1 more

Open access · goldAbstract read
In one paragraph

Article in Retrovirology, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 174 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
174citing papers in PubMed, 1 pooled it
5.2field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

174 citing papers in PubMed, 1 synthesis or guideline pooled it, 272 citations in OpenAlex.

  1. Pooled it
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  11. Identification of a conserved RNA structure in thebioRxiv : the preprint server for biology · 2025
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  19. Effect of miR-17 onFrontiers in veterinary science · 2024
    Article
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114 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 1 country.

Jasmine K AhluwaliaInstitute of Genomics and Integrative Biology (IGIB) CSIR, Delhi, India. jasmine.ahluwalia@igib.res.in
Sohrab Zafar Khan
Kartik Soni
Pratima Rawat
Ankit Gupta
Manoj Hariharan
Vinod Scaria
Mukesh Lalwani
Beena Pillai
Debashis Mitra
Samir K Brahmachari
Institute of Genomics and Integrative Biology · INNational Centre for Cell Science · INSavitribai Phule Pune University · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundCellular miRNAs play an important role in the regulation of gene expression in eukaryotes. Recently, miRNAs have also been shown to be able to target and inhibit viral gene expression. Computational predictions revealed earlier that the HIV-1 genome includes regions that may be potentially targeted by human miRNAs. Here we report the functionality of predicted miR-29a target site in the HIV-1 nef gene.

resultsWe find that the human miRNAs hsa-miR-29a and 29b are expressed in human peripheral blood mononuclear cells. Expression of a luciferase reporter bearing the nef miR-29a target site was decreased compared to the luciferase construct without the target site. Locked nucleic acid modified anti-miRNAs targeted against hsa-miR-29a and 29b specifically reversed the inhibitory effect mediated by cellular miRNAs on the target site. Ectopic expression of the miRNA results in repression of the target Nef protein and reduction of virus levels.

conclusionOur results show that the cellular miRNA hsa-miR29a downregulates the expression of Nef protein and interferes with HIV-1 replication.

Indexed as

Gene Expression Regulation, ViralMicroRNAsBase SequenceCell LineHeLa CellsHIV-1HumansLeukocytes, MononuclearMolecular Sequence Datanef Gene Products, Human Immunodeficiency VirusVirus ReplicationMicroRNAsMIRN29a microRNA, humannef Gene Products, Human Immunodeficiency Virus

Identifiers

PMID19102781
PMCPMC2635386
OpenAlexW2047781063

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.