Evidence map›Paper›PMID 19101978›Full record

ArticleChembiochem : a European journal of chemical biology2009

The molecular basis of inhibition of Golgi alpha-mannosidase II by mannostatin A.

Douglas A Kuntz, Wei Zhong, Jun Guo, David R Rose, Geert-Jan Boons

Erratum issuedOpen access · greenAbstract read
In one paragraph

Article in Chembiochem : a European journal of chemical biology, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
1.5field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 37 citations in OpenAlex.

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4 · The record

Corrections and comments

  • Erratum issued
5 · Who and what money

Authors and funding

5 authors at 3 institutions in 2 countries.

Douglas A KuntzOntario Cancer Institute and Department of Medical Biophysics, University of Toronto, Toronto, Ontario M5G 1L7, Canada.
Wei Zhong
Jun Guo
David R Rose
Geert-Jan Boons
University of Georgia · USOntario Institute for Cancer Research · CAUniversity of Toronto · CA

Funding

ZINC FINGER-DNA COMPLEXP41RR001646 · NCRR · CORNELL UNIVERSITY ITHACA · PI THORNE, ROBERT E. · 1985 to 2011
$23.8M
ZINC DEFICIENCY &PROTEIN EXPRESSION IN RAT OLFACTORY BULBSP41RR005351 · NCRR · UNIVERSITY OF GEORGIA (UGA) · PI MOREMEN, KELLEY W. · 1989 to 2011
$18.4M
TR&D3. Approaches to Proteoglycan Function at Biochemical and Cellular LevelsP41GM103390 · NIGMS · UNIVERSITY OF GEORGIA · PI LIVE, DAVID H · 2012 to 2019
$14.5M
Synthetic Oligosaccharides for Probing Infection and Innate ImmunityR01GM061761 · NIGMS · UNIVERSITY OF GEORGIA (UGA) · PI BOONS, GEERT-JAN · 2000 to 2014
$4.5M
NCRR NIH HHS 5P41RR05 351-18NCRR NIH HHS P41 RR001646NCRR NIH HHS P41 RR005351NCRR NIH HHS RR-01646NIGMS NIH HHS DMR-0225180NIGMS NIH HHS P41 GM103390NIGMS NIH HHS R01 GM061761
6 · The paper itself

Abstract

Mannostatin A is a potent inhibitor of the mannose-trimming enzyme, Golgi alpha-mannosidase II (GMII), which acts late in the N-glycan processing pathway. Inhibition of this enzyme provides a route to blocking the transformation-associated changes in cancer cell surface oligosaccharide structures. Here, we report on the synthesis of new Mannostatin derivatives and analyze their binding in the active site of Drosophila GMII by X-ray crystallography. The results indicate that the interaction with the backbone carbonyl of Arg876 is crucial to the high potency of the inhibitor-an effect enhanced by the hydrophobic interaction between the thiomethyl group and an aromatic pocket vicinal to the cleavage site. The various structures indicate that differences in the hydration of protein-ligand complexes are also important determinants of plasticity as well as selectivity of inhibitor binding.

Indexed as

AnimalsCatalytic DomainCrystallography, X-RayCyclopentanesDrosophila melanogasterEnzyme InhibitorsHydrophobic and Hydrophilic InteractionsMannosidasesSubstrate SpecificitySulfurCyclopentanesEnzyme InhibitorsMannosidasesmannostatin Amannosyl-oligosaccharide 1,3 - 1,6-alpha-mannosidaseSulfur

Identifiers

PMID19101978
PMCPMC3956299
OpenAlexW2121922160

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.