Evidence map›Paper›PMID 19096361›Full record

ArticleMolecular systems biology2008

Robust and sensitive control of a quorum-sensing circuit by two interlocked feedback loops.

Joshua W Williams, Xiaohui Cui, Andre Levchenko, Ann M Stevens

Abstract read
In one paragraph

Article in Molecular systems biology, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 41 papers.

0numbers the graph read from it
0cells of the map it votes in
41citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

41 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Review
  6. Article
  7. Phenotypic memory in quorum sensing.PLoS computational biology · 2024
    Article
  8. Article
  9. Parameters, architecture and emergent properties of theJournal of the Royal Society, Interface · 2023
    Article
  10. Article
  11. Antiactivators prevent self-sensing inProceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  12. Article
  13. Article
  14. General Analyses of Gene Expression Dependencies on Genetic Burden.Frontiers in bioengineering and biotechnology · 2020
    Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Core principles of bacterial autoinducer systems.Microbiology and molecular biology reviews : MMBR · 2015
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Joshua W WilliamsDepartment of Biological Sciences, Virginia Tech, Blacksburg, VA 24061, USA.
Xiaohui Cui
Andre Levchenko
Ann M Stevens

Funding

Cell-Cell Communicaton in Bacterial Quorum SensingR01GM066786 · NIGMS · JOHNS HOPKINS UNIVERSITY · PI LEVCHENKO, ANDRE · 2003 to 2008
$1.6M
NIGMS NIH HHS R01 GM066786
6 · The paper itself

Abstract

The quorum-sensing (QS) response of Vibrio fischeri involves a rapid switch between low and high induction states of the lux operon over a narrow concentration range of the autoinducer (AI) 3-oxo-hexanoyl-L-homoserine lactone. In this system, LuxR is an AI-dependent positive regulator of the lux operon, which encodes the AI synthase. This creates a positive feedback loop common in many bacterial species that exhibit QS-controlled gene expression. Applying a combination of modeling and experimental analyses, we provide evidence for a LuxR autoregulatory feedback loop that allows LuxR to increase its concentration in the cell during the switch to full lux activation. Using synthetic lux gene fragments, with or without the AI synthase gene, we show that the buildup of LuxR provides more sensitivity to increasing AI, and promotes the induction process. Elevated LuxR levels buffer against spurious variations in AI levels ensuring a robust response that endows the system with enhanced hysteresis. LuxR autoregulation also allows for two distinct responses within the same cell population.

Indexed as

Feedback, Physiological4-ButyrolactoneAlgorithmsAliivibrio fischeriEscherichia coliEscherichia coli ProteinsFlow CytometryGene Regulatory NetworksModels, GeneticOperonQuorum SensingRepressor ProteinsReproducibility of ResultsTrans-ActivatorsTranscription FactorsUp-Regulation4-ButyrolactoneEscherichia coli ProteinsLuxR autoinducer binding proteinsN-(3-oxohexanoyl)-3-aminodihydro-2(3H)-furanoneRepressor ProteinsTrans-ActivatorsTranscription Factors

Identifiers

PMID19096361
PMCPMC2615304

What OpenQuestion holds

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LicenceCC BY-NC-SA
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.