Evidence map›Paper›PMID 19094242›Full record

ArticleBMC neuroscience2008

CLOCK expression identifies developing circadian oscillator neurons in the brains of Drosophila embryos.

Jerry H Houl, Fanny Ng, Pete Taylor, Paul E Hardin

Open access · goldAbstract read
In one paragraph

Article in BMC neuroscience, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
0.9field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 64 citations in OpenAlex.

  1. Article
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  5. Timeless noncoding DNA contains cell-type preferential enhancers important for proper Drosophila circadian regulation.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  6. Circadian disruption of memory consolidation inFrontiers in systems neuroscience · 2023
    Article
  7. Article
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  9. Article
  10. Review
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  12. CLOCK stabilizes CYCLE to initiate clock function inProceedings of the National Academy of Sciences of the United States of America · 2017
    Article
  13. Article
  14. Article
  15. Circadian Activators Are Expressed Days before They Initiate Clock Function in Late Pacemaker Neurons from Drosophila.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2015
    Article
  16. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Jerry H HoulCenter for Research on Biological Clocks, Department of Biology, Texas A&M University, 3258 TAMU, College Station, TX 77843, USA. jhoul@mail.bio.tamu.edu
Fanny Ng
Pete Taylor
Paul E Hardin
Texas A&M University · USUniversity of Houston · US

Funding

Circadian Regulatory Circuits in DrosophilaR01NS051280 · NINDS · UNIVERSITY OF HOUSTON · PI HARDIN, PAUL E · 2005 to 2008
$1.2M
NINDS NIH HHS NS051280NINDS NIH HHS R01 NS051280
6 · The paper itself

Abstract

backgroundThe Drosophila circadian oscillator is composed of transcriptional feedback loops in which CLOCK-CYCLE (CLK-CYC) heterodimers activate their feedback regulators period (per) and timeless (tim) via E-box mediated transcription. These feedback loop oscillators are present in distinct clusters of dorsal and lateral neurons in the adult brain, but how this pattern of expression is established during development is not known. Since CLK is required to initiate feedback loop function, defining the pattern of CLK expression in embryos and larvae will shed light on oscillator neuron development.

resultsA novel CLK antiserum is used to show that CLK expression in the larval CNS and adult brain is limited to circadian oscillator cells. CLK is initially expressed in presumptive small ventral lateral neurons (s-LNvs), dorsal neurons 2 s (DN2s), and dorsal neuron 1 s (DN1s) at embryonic stage (ES) 16, and this CLK expression pattern persists through larval development. PER then accumulates in all CLK-expressing cells except presumptive DN2s during late ES 16 and ES 17, consistent with the delayed accumulation of PER in adult oscillator neurons and antiphase cycling of PER in larval DN2s. PER is also expressed in non-CLK-expressing cells in the embryonic CNS starting at ES 12. Although PER expression in CLK-negative cells continues in ClkJrk embryos, PER expression in cells that co-express PER and CLK is eliminated.

conclusionThese data demonstrate that brain oscillator neurons begin development during embryogenesis, that PER expression in non-oscillator cells is CLK-independent, and that oscillator phase is an intrinsic characteristic of brain oscillator neurons. These results define the temporal and spatial coordinates of factors that initiate Clk expression, imply that circadian photoreceptors are not activated until the end of embryogenesis, and suggest that PER functions in a different capacity before oscillator cell development is initiated.

Indexed as

AnimalsBiological ClocksBrainCircadian RhythmCLOCK ProteinsDrosophilaDrosophila ProteinsGene ExpressionGenes, InsectLarvaMicroscopy, ConfocalNeurogenesisNeuronsNuclear ProteinsPeriod Circadian ProteinsPhotoreceptor Cells, InvertebrateClk protein, DrosophilaCLOCK ProteinsDrosophila ProteinsNuclear ProteinsPeriod Circadian ProteinsPER protein, DrosophilaTranscription Factors

Identifiers

PMID19094242
PMCPMC2628352
OpenAlexW2019477206

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.