Evidence map›Paper›PMID 19092775›Full record

ArticleEuropean journal of human genetics : EJHG2009

Significant evidence for linkage to chromosome 5q13 in a genome-wide scan for asthma in an extended pedigree resource.

Craig C Teerlink, Nicola J Camp, Aruna Bansal, Robert Crapo, Dana Hughes, Edward Kort, Kerry Rowe, Lisa A Cannon-Albright

Abstract read
In one paragraph

Article in European journal of human genetics : EJHG, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed, 1 pooled it
1.2field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 1 synthesis or guideline pooled it, 12 citations in OpenAlex.

  1. Pooled it
  2. Association betweenDiagnostics (Basel, Switzerland) · 2023
    Article
  3. Article
  4. An understanding of the genetic basis of asthma.The Indian journal of medical research · 2011
    Review
  5. Article
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 2 countries.

Craig C TeerlinkDepartment of Biomedical Informatics, Division of Genetic Epidemiology, University of Utah School of Medicine, Salt Lake City, UT 84112-5750, USA. craig.teerlink@utah.edu
Nicola J Camp
Aruna Bansal
Robert Crapo
Dana Hughes
Edward Kort
Kerry Rowe
Lisa A Cannon-Albright
Intermountain Healthcare · USUniversity of Utah · USGlaxoSmithKline (United Kingdom) · GBLDS Hospital · US

Funding

UNIVERSITY OF UTAH MEDICAL INFORMATICS TRAININGT15LM007124 · NLM · UTAH STATE HIGHER EDUCATION SYSTEM--UNIVERSITY OF UTAH · PI Karen Louise Eilbeck · 1997 to 2026
$22.0M
MU Biomedical Informatics Research Training ProgramT15LM007089 · NLM · UNIVERSITY OF MISSOURI-COLUMBIA · PI SIMOES, EDUARDO J · 1992 to 2011
$6.9M
GENETIC ANALYSIS TECHNIQUES FOR COMMON CANCERSK07CA098364 · NCI · UNIVERSITY OF UTAH · PI CAMP, NICOLA J. · 2004 to 2008
$701k
NCI NIH HHS CA098364NCI NIH HHS K07 CA098364NLM NIH HHS 1T15LM007124NLM NIH HHS T15 LM007089NLM NIH HHS T15 LM007124
6 · The paper itself

Abstract

Asthma is a multifactorial disease with undetermined genetic factors. We performed a genome-wide scan to identify predisposition loci for asthma. The asthma phenotype consisted of physician-confirmed presence or absence of asthma symptoms. We analyzed 81 extended Utah pedigrees ranging from three to six generations, including 742 affected individuals, ranging from 2 to 40 per pedigree. We performed parametric multipoint linkage analyses with dominant and recessive models. Our analysis revealed genome-wide significant evidence of linkage to region 5q13 (log of the odds ratio (LOD)=3.8, recessive model), and suggestive evidence for linkage to region 6p21 (LOD=2.1, dominant model). Both the 5q13 and 6p21 regions indicated in these analyses have been previously identified as regions of interest in other genome-wide scans for asthma-related phenotypes. The evidence of linkage at the 5q13 region represents the first significant evidence for linkage on a genome-wide basis for this locus. Linked pedigrees localize the region to approximately between 92.3-105.5 Mb.

Indexed as

Genetic LinkageGenome, HumanAsthmaChromosome MappingChromosomes, Human, Pair 5Chromosomes, Human, Pair 6Family HealthFemaleHumansLod ScoreMalePedigreePhenotype

Identifiers

PMID19092775
PMCPMC2672963
OpenAlexW2098920619

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.