Evidence map›Paper›PMID 1909030›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America1991

Molecular characterization of five human anti-human immunodeficiency virus type 1 antibody heavy chains reveals extensive somatic mutation typical of an antigen-driven immune response.

J S Andris, S Johnson, S Zolla-Pazner, J D Capra

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 1991. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed.

  1. Article
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  5. Article
  6. Review
  7. Article
  8. Article
  9. Article
  10. Human autoantibody recognition of DNA.Proceedings of the National Academy of Sciences of the United States of America · 1995
    Article
  11. HIV-mediated B-lymphocyte activation and lymphomagenesis.Journal of clinical immunology · 1995
    Review
  12. Review
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. B-lymphocytes and autoantibody profiles in HIV disease.Clinical reviews in allergy & immunology
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

J S AndrisDepartment of Microbiology, University of Texas Southwestern Medical Center, Dallas, TX 75235.
S Johnson
S Zolla-Pazner
J D Capra

Funding

IMMUNOGLOBULIN V REGION STRUCTURES: GENETIC IMPLICATIONR01AI012127 · NIAID · UNIVERSITY OF TEXAS SW MED CTR/DALLAS · PI CAPRA, J DONALD · 1985 to 2003
$1.2M
THE LYL/TAL GENE FAMILY--ALTERATION IN HUMAN LEUKEMIAP01CA044016 · NCI · UNIVERSITY OF TEXAS SW MED CTR/DALLAS · PI CAPRA, J DONALD · 1987 to 1996
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TISSUE-SPECIFIC EXPRESSION OF THE KALLIKREIN GENE FAMILYP01GM031689 · NIGMS · UNIVERSITY OF TEXAS SW MED CTR/DALLAS · PI MACDONALD, RAYMOND J. · 1985 to 1998
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IMMUNOGLOBULIN V REGION STRUCTURES;GENETIC IMPLICATIONSR37AI012127 · NIAID · UNIVERSITY OF TEXAS SW MED CTR/DALLAS · PI CAPRA, J DONALD · 1987 to 1997
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NCI NIH HHS CA44016NIAID NIH HHS AI12127NIGMS NIH HHS GM31689
6 · The paper itself

Abstract

We report the heavy chain variable region sequences from the cDNAs of five previously described monoclonal cell lines producing human antibodies specific for the human immunodeficiency virus type 1 and detail the molecular characteristics, germ-line origins, and extent of somatic mutation among these antibodies. Three of the five heavy chain variable regions derive from the VHIV gene family, but each has arisen from a different heavy chain variable region (VH) gene segment within the VHIV family. In addition, one is derived from a VHI gene segment, and one is derived from a VHV gene segment. Since four of the five antibodies arise from known germ-line VH elements, a precise determination of the extent of somatic variation is possible. The amount of variation from the closest germ-line sequence ranges from 4.5% to 14.8% among these antibodies, most of which is concentrated in the complementarity-determining regions. In general, the diversity (D) segments are long, characteristic of D-D fusions and/or extensive terminal deoxynucleotidyltransferase activity; however, definitive homologies cannot be found with the known germ-line D segments. Joining (JH) gene segment utilization appears random. The use of five different germ-line VH gene segments and extensive somatic mutation provides evidence that a polyclonal, antigen-driven immune response occurs during the natural infection with human immunodeficiency virus.

Indexed as

Genes, ImmunoglobulinMultigene FamilyMutationAmino Acid SequenceAntibodies, MonoclonalAntibody FormationBase SequenceCell LineCloning, MolecularHIV-1HIV AntibodiesHumansImmunoglobulin Heavy ChainsImmunoglobulin Variable RegionMolecular Sequence DataOligonucleotide ProbesAntibodies, MonoclonalHIV AntibodiesImmunoglobulin Heavy ChainsImmunoglobulin Variable RegionOligonucleotide Probes

Identifiers

PMID1909030
PMCPMC52387

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.