Evidence map›Paper›PMID 19079642›Full record

ArticleThe New phytologist2004

Candidate gene polymorphisms associated with salt tolerance in wild sunflower hybrids: implications for the origin of Helianthus paradoxus, a diploid hybrid species.

Christian Lexer, Zhao Lai, Loren H Rieseberg

Open access · greenAbstract read
In one paragraph

Article in The New phytologist, 2004. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
7.5field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 84 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Hybrid zones: windows on climate change.Trends in ecology & evolution · 2015
    Review
  12. Article
  13. Article
  14. Article
  15. The role of gene expression in ecological speciation.Annals of the New York Academy of Sciences · 2010
    Review
  16. Speciation genes in plants.Annals of botany · 2010
    Review
  17. Genetics and ecological speciation.Proceedings of the National Academy of Sciences of the United States of America · 2009
    Review
  18. Review. The genic view of plant speciation: recent progress and emerging questions.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2008
    Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Christian LexerIndiana University, Jordan Hall 142, 1001 East Third Street, Bloomington, IN 47405, USA.
Zhao Lai
Loren H Rieseberg
Indiana University Bloomington · US

Funding

TRANSGRESSIVE SEGREGATION, ADAPTATION, AND SPECIATIONR01GM059065 · NIGMS · UNIVERSITY OF BRITISH COLUMBIA · PI RIESEBERG, LOREN H · 2000 to 2008
$1.9M
NIGMS NIH HHS R01 GM059065
6 · The paper itself

Abstract

We have studied the origin of salt adaptation in wild sunflower hybrids (Helianthus annuus x H. petiolaris), the precursors of the diploid hybrid species H. paradoxus, at the level of phenotypic traits and quantitative trait loci (QTLs). Here, we review this work and present new results on candidate gene polymorphisms.Salt tolerance candidate genes were identified in expressed sequence tag (EST) libraries of sunflower, based on homology to genes with known function, and on previous QTL results. EST polymorphisms were assayed by denaturing HPLC and for which fitness estimates in the wild genetically mapped in an interspecific BC(2) were available.Out of 11 genes studied, one mapped to a salt tolerance QTL. This EST codes for a Ca-dependent protein kinase (CDPK) and stems from stress-induced root tissue of Helianthus annuus. Two additional stress-induced genes exhibited a significant fitness effect in the wild: an ER-type calcium ATPase, and a transcriptional regulator.Our results suggest a possible adaptive role for Ca-dependent salt tolerance genes in wild sunflower hybrids. Also, transgressive segregation appears to be sufficient to explain the origin of adaptive genetic variation in hybrids.

Identifiers

PMID19079642
PMCPMC2601661
OpenAlexW2171653557

What OpenQuestion holds

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Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.