Evidence map›Paper›PMID 19075293›Full record

ArticleThe Journal of experimental medicine2008

RS rearrangement frequency as a marker of receptor editing in lupus and type 1 diabetes.

Anil K Panigrahi, Noah G Goodman, Robert A Eisenberg, Michael R Rickels, Ali Naji, Eline T Luning Prak

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of experimental medicine, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 45 papers.

0numbers the graph read from it
0cells of the map it votes in
45citing papers in PubMed
3.1field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

45 citing papers in PubMed, 76 citations in OpenAlex.

  1. Trial
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  5. B cell tolerance and autoimmunity: Lessons from repertoires.The Journal of experimental medicine · 2024
    Review
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  7. Article
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  13. Endotypes in T1D: B lymphocytes and early onset.Current opinion in endocrinology, diabetes, and obesity · 2020
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 4 institutions in 2 countries.

Anil K PanigrahiDepartment of Pathology and Laboratory Medicine, University of Pennsylvania School of Medicine, Philadelphia, PA 19104, USA.
Noah G Goodman
Robert A Eisenberg
Michael R Rickels
Ali Naji
Eline T Luning Prak
Emory University Hospital · USCenter for Rheumatology · USDiabetes Australia · AUUniversity of Pennsylvania · US

Funding

Continuation of Clin Islet Transplantation Consortium: Data Coordinating CenterU01DK070431 · NIDDK · UNIVERSITY OF IOWA · PI CLARKE, WILLIAM R. · 2004 to 2014
$54.8M
B-Lymphocyte Immunotherapy in Islet TransplantationU01DK070430 · NIDDK · UNIVERSITY OF PENNSYLVANIA · PI NAJI, ALI · 2004 to 2011
$10.1M
EXPERIMENTAL INDUCTION OF SLE BY ALTERED IAR01AR034156 · NIAMS · UNIVERSITY OF PENNSYLVANIA · PI LUNING PRAK, ELINE TJETSKE · 1986 to 2012
$3.5M
NIAMS NIH HHS R01 AR034156NIDDK NIH HHS U01 DK070430
6 · The paper itself

Abstract

Continued antibody gene rearrangement, termed receptor editing, is an important mechanism of central B cell tolerance that may be defective in some autoimmune individuals. We describe a quantitative assay for recombining sequence (RS) rearrangement that we use to estimate levels of antibody light chain receptor editing in various B cell populations. RS rearrangement is a recombination of a noncoding gene segment in the kappa antibody light chain locus. RS rearrangement levels are highest in the most highly edited B cells, and are inappropriately low in autoimmune mouse models of systemic lupus erythematosus (SLE) and type 1 diabetes (T1D), including those without overt disease. Low RS rearrangement levels are also observed in human subjects with SLE or T1D.

Indexed as

Gene Rearrangement, B-Lymphocyte, Light ChainGenetic MarkersAdultAgedAnimalsAutoimmunityB-LymphocytesDiabetes Mellitus, Type 1FemaleGenes, ImmunoglobulinHumansLupus Erythematosus, SystemicLymphocyte SubsetsMaleMiceMice, Inbred C57BLGenetic Markers

Identifiers

PMID19075293
PMCPMC2605238
OpenAlexW2159690353

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.