Evidence map›Paper›PMID 19075229›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2008

Role of root UV-B sensing in Arabidopsis early seedling development.

Hongyun Tong, Colin D Leasure, Xuewen Hou, Gigi Yuen, Winslow Briggs, Zheng-Hui He

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 54 papers.

0numbers the graph read from it
0cells of the map it votes in
54citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

54 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Root-specific photoreception directs early root development by HY5-regulated ROS balance.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  6. Article
  7. microPublication biology · 2024
    Article
  8. Genetic regulation of lateral root development.Plant signaling & behavior · 2023
    Review
  9. Review
  10. Article
  11. Review
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Genome-Wide Identification and Transcriptional Analysis of ArabidopsisInternational journal of molecular sciences · 2021
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Hongyun TongDepartment of Biology, San Francisco State University, 1600 Holloway Avenue, San Francisco, CA 94132, USA.
Colin D Leasure
Xuewen Hou
Gigi Yuen
Winslow Briggs
Zheng-Hui He

Funding

TOXIC METALS IN PLANTS--METAL INDUCED GENE EXPRESSION IN METAL TOLERANT PLANTSS06GM052588 · NIGMS · SAN FRANCISCO STATE UNIVERSITY · PI VAZQUEZ, MARIEL · 1995 to 2010
$31.2M
Sqt1p, important regulator of the kinetochore complexesP20MD000262 · NIMHD · SAN FRANCISCO STATE UNIVERSITY · PI CORRIGAN, ROBERT · 2002 to 2006
$5.0M
NIGMS NIH HHS S06 GM052588NIGMS NIH HHS S06 GM52588NIMHD NIH HHS P20 MD000262
6 · The paper itself

Abstract

All sun-exposed organisms are affected by UV-B [(UVB) 280-320 nm], an integral part of sunlight. UVB can cause stresses or act as a developmental signal depending on its fluence levels. In plants, the mechanism by which high-fluence-rate UVB causes damages and activates DNA-repair systems has been extensively studied. However, little is known about how nondamaging low-fluence-rate UVB is perceived to regulate plant morphogenesis and development. Here, we report the identification of an Arabidopsis mutant, root UVB sensitive 1 (rus1), whose primary root is hypersensitive to very low-fluence-rate (VLF) UVB. Under standard growth-chamber fluorescent white light, rus1 displays stunted root growth and fails to form postembryonic leaves. Experiments with different monochromatic light sources showed that rus1 phenotypes can be rescued if the seedlings are allowed to grow in light conditions with minimum UVB. We determined that roots, not other organs, perceive the UVB signal. Genetic and molecular analyses confirmed that the root light-sensitive phenotypes are independent of all other known plant photoreceptors. Three rus1 alleles have been identified and characterized. A map-based approach was used to identify the RUS1 locus. RUS1 encodes a protein that contains DUF647 (domain of unknown function 647), a domain highly conserved in eukaryotes. Our results demonstrate a root VLF UVB-sensing mechanism that is involved in Arabidopsis early seedling morphogenesis and development.

Indexed as

Ultraviolet RaysAllelesArabidopsisArabidopsis ProteinsMutationPlant LeavesPlant RootsQuantitative Trait LociSeedlingsArabidopsis Proteins

Identifiers

PMID19075229
PMCPMC2634920

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.