Evidence map›Paper›PMID 19074801›Full record

ArticleInvestigative ophthalmology & visual science2009

A homozygous missense mutation in the IRBP gene (RBP3) associated with autosomal recessive retinitis pigmentosa.

Anneke I den Hollander, Terri L McGee, Carmela Ziviello, Sandro Banfi, Thaddeus P Dryja, Federico Gonzalez-Fernandez, Debashis Ghosh, Eliot L Berson

Open access · greenAbstract read
In one paragraph

Article in Investigative ophthalmology & visual science, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 76 papers.

0numbers the graph read from it
0cells of the map it votes in
76citing papers in PubMed
2.4field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

76 citing papers in PubMed, 108 citations in OpenAlex.

  1. Article
  2. Neuroprotection in Diabetes Retinal Disease: An Unmet Medical Need.International journal of molecular sciences · 2026
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  20. Genetic dissection of non-syndromic retinitis pigmentosa.Indian journal of ophthalmology · 2022
    Review

16 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 5 institutions in 2 countries.

Anneke I den HollanderBerman-Gund Laboratory for the Study of Retinal Degenerations, Harvard Medical School, Massachusetts Eye and Ear Infirmary, Massachusetts 02114, USA.
Terri L McGee
Carmela Ziviello
Sandro Banfi
Thaddeus P Dryja
Federico Gonzalez-Fernandez
Debashis Ghosh
Eliot L Berson
Berman Center for Outcomes and Clinical Research · USHauptman-Woodward Medical Research Institute · USInstitute of Genetics and Biophysics · ITMassachusetts Eye and Ear Infirmary · USUniversity at Buffalo, State University of New York · US

Funding

P30 Core Grant for Vision ResearchP30EY014104 · NEI · MASSACHUSETTS EYE AND EAR INFIRMARY · PI Eric A Pierce · 2002 to 2026
$15.1M
IRBP--STRUCTURE/FUNCTIONR01EY009412 · NEI · UNIVERSITY OF VIRGINIA CHARLOTTESVILLE · PI GHOSH, DEBASHIS, GONZALEZ-FERNANDEZ, FEDERICO · 1999 to 2011
$3.0M
CANDIDATE GENE STUDY OF INHERITED RETINAL DEGENERATIONSR01EY008683 · NEI · MASSACHUSETTS EYE AND EAR INFIRMARY · PI DRYJA, THADDEUS P · 1990 to 2005
$2.6M
RETINAL ELECTROPHYSIOLOGICAL STUDIESR01EY000169 · NEI · HARVARD UNIVERSITY (MEDICAL SCHOOL) · PI BERSON, ELIOT L · 1985 to 2007
$2.0M
ELECTROPHYSIOLOGICAL STUDIES OF RETINAL DEGENERATIONSR37EY000169 · NEI · HARVARD UNIVERSITY (MEDICAL SCHOOL) · PI BERSON, ELIOT L · 1992 to 2002
$1.2M
IRBP--STRUCTURE AND FUNCTIONR29EY009412 · NEI · UNIVERSITY OF VIRGINIA CHARLOTTESVILLE · PI GONZALEZ-FERNANDEZ, FEDERICO · 1993 to 1997
–
NEI NIH HHS EY00169NEI NIH HHS EY009412NEI NIH HHS EY08683NEI NIH HHS P30 EY014104NEI NIH HHS P30-EY014104NEI NIH HHS R01 EY000169NEI NIH HHS R01 EY008683NEI NIH HHS R01 EY009412NEI NIH HHS R37 EY000169Telethon TGM06D01
6 · The paper itself

Abstract

purposeInterphotoreceptor retinoid-binding protein (IRBP) has been considered essential for normal rod and cone function, as it mediates the transport of retinoids between the photoreceptors and the retinal pigment epithelium. This study was performed to determine whether mutations in the IRBP gene (RBP3) are associated with photoreceptor degeneration.

methodsA consanguineous family was ascertained in which four children had autosomal recessive retinitis pigmentosa (RP). Homozygosity mapping performed with SNP microarrays revealed only one homozygous region shared by all four affected siblings. Sequencing of RBP3, contained in this region, was performed in this family and others with recessive RP. Screening was also performed on patients with various other forms of retinal degeneration or malfunction.

resultsSequence analysis of RBP3 revealed a homozygous missense mutation (p.Asp1080Asn) in the four affected siblings. The mutation affects a residue that is completely conserved in all four homologous modules of the IRBP protein of vertebrate species and in C-terminal-processing proteases, photosynthesis enzymes found in bacteria, algae, and plants. Based on the previously reported crystal structure of Xenopus IRBP, the authors predict that the Asp1080-mediated conserved salt bridge that appears to participate in scaffolding of the retinol-binding domain is abolished by the mutation. No RBP3 mutations were detected in 395 unrelated patients with recessive or isolate RP or in 680 patients with other forms of hereditary retinal degeneration.

conclusionsMutations in RBP3 are an infrequent cause of autosomal recessive RP. The mutation Asp1080Asn may alter the conformation of the IRBP protein by disrupting a conserved salt bridge.

Indexed as

Genes, RecessiveHomozygoteMutation, MissenseConsanguinityDNA PrimersElectroretinographyEye ProteinsFemaleGenotypeHumansMaleOphthalmoscopyPedigreePolymorphism, Single NucleotideProtein Structure, TertiaryRetinitis PigmentosaDNA PrimersEye ProteinsRetinol-Binding ProteinsRetinol-Binding Proteins, Interstitial

Identifiers

PMID19074801
PMCPMC2823395
OpenAlexW1972132166

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.