Evidence map›Paper›PMID 19074429›Full record

ArticleThe Journal of biological chemistry2009

Species-specific inhibition of APOBEC3C by the prototype foamy virus protein bet.

Mario Perkovic, Stanislaw Schmidt, Daniela Marino, Rebecca A Russell, Benjamin Stauch, Henning Hofmann, Ferdinand Kopietz, Björn-Philipp Kloke, Jörg Zielonka, Heike Ströver and 7 more

Open access · hybridAbstract readComparative Study
In one paragraph

Article in The Journal of biological chemistry, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 57 papers.

0numbers the graph read from it
0cells of the map it votes in
57citing papers in PubMed
1.6field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

57 citing papers in PubMed, 71 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors at 5 institutions in 2 countries.

Mario PerkovicDivision of Medical Biotechnology, Paul-Ehrlich-Institut, Langen 63225, Germany.
Stanislaw Schmidt
Daniela Marino
Rebecca A Russell
Benjamin Stauch
Henning Hofmann
Ferdinand Kopietz
Björn-Philipp Kloke
Jörg Zielonka
Heike Ströver
Johannes Hermle
Dirk Lindemann
Vinay K Pathak
Gisbert Schneider
Martin Löchelt
Klaus Cichutek
Carsten Münk
German Cancer Research Center · DEHeinrich Heine University Düsseldorf · DEGoethe University Frankfurt · DENational Institutes of Health · USPaul Ehrlich Institut · DE

Funding

Structure and Function of Vif and APOBEC3 (A3) ProteinsZIABC010595 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI PATHAK, VINAY K. · 2009 to 2025
$14.8M
Structure and Function of APOBEC ProteinsZ01BC010595 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI PATHAK, VINAY K. · 2004 to 2008
$1.3M
Intramural NIH HHS
6 · The paper itself

Abstract

The APOBEC3 cytidine deaminases are part of the intrinsic defense of cells against retroviruses. Lentiviruses and spumaviruses have evolved essential accessory proteins, Vif and Bet, respectively, which counteract the APOBEC3 proteins. We show here that Bet of the Prototype foamy virus inhibits the antiviral APOBEC3C activity by a mechanism distinct to Vif: Bet forms a complex with APOBEC3C without inducing its degradation. Bet abolished APOBEC3C dimerization as shown by coimmunoprecipitation and cross-linking experiments. These findings implicate a physical interaction between Bet and the APOBEC3C. Subsequently, we identified the Bet interaction domain in human APOBEC3C in the predicted APOBEC3C dimerization site. Taken together, these data support the hypothesis that Bet inhibits incorporation of APOBEC3Cs into retroviral particles. Bet likely achieves this by trapping APOBEC3C protein in complexes rendering them unavailable for newly generated viruses due to direct immobilization.

Indexed as

AnimalsAPOBEC-3G DeaminaseCells, CulturedChlorocebus aethiopsCricetinaeCross-Linking ReagentsCytidine DeaminaseDimerizationGene Products, vifHumansImmunoblottingImmunoprecipitationKidneyLentivirusMacaca mulattaMacaca nemestrinaAPOBEC-3G DeaminaseAPOBEC3G protein, humanbet protein, human foamy virusCross-Linking ReagentsCytidine DeaminaseGene Products, vifRetroviridae Proteins

Identifiers

PMID19074429
PMCPMC2645832
OpenAlexW2088982777

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.