Evidence map›Paper›PMID 19073733›Full record

ArticleJournal of virology2009

Upregulation of human T-cell leukemia virus type 1 antisense transcription by the viral tax protein.

Sébastien Landry, Marilène Halin, Amandine Vargas, Isabelle Lemasson, Jean-Michel Mesnard, Benoit Barbeau

Open access · greenAbstract read
In one paragraph

Article in Journal of virology, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
1.6field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 41 citations in OpenAlex.

  1. Review
  2. Article
  3. Review
  4. Review
  5. Article
  6. Article
  7. Review
  8. Article
  9. Article
  10. Review
  11. Review
  12. Review
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. HBZ and its roles in HTLV-1 oncogenesis.Frontiers in microbiology · 2012
    Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 3 countries.

Sébastien LandryUniversité du Québec à Montréal, Département des Sciences Biologiques, Centre de recherche BioMed, Montréal, Québec, Canada.
Marilène Halin
Amandine Vargas
Isabelle Lemasson
Jean-Michel Mesnard
Benoit Barbeau
Université du Québec à Montréal · CACentre National de la Recherche Scientifique · FREast Carolina University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Several studies have recently demonstrated the existence of human T-cell leukemia virus type 1 (HTLV-1) antisense transcripts, which allow the synthesis of the newly described HBZ protein. Although previous reports have been aimed at understanding the potential role of the HBZ protein in HTLV-1 pathogenesis, little is known as to how this viral gene is regulated. Here, using our K30-3'asLuc reporter construct, we show that the viral Tax protein upregulates antisense transcription through its action on the TRE sequences located in the 3' long terminal repeat. Generation of stable clones in 293T cells demonstrated that Tax-induced HBZ expression is importantly influenced by the integration site in the host genome. The cellular DNA context could thus affect the level of HBZ mRNA expression in infected cells.

Indexed as

Gene Expression Regulation, ViralTranscription, GeneticBasic-Leucine Zipper Transcription FactorsCell LineGene Products, taxHumansHuman T-lymphotropic virus 1Retroviridae ProteinsRNA, AntisenseRNA, ViralUp-RegulationViral ProteinsBasic-Leucine Zipper Transcription FactorsGene Products, taxHBZ protein, human T-cell leukemia virus type IRetroviridae ProteinsRNA, AntisenseRNA, ViralViral Proteins

Identifiers

PMID19073733
PMCPMC2643783
OpenAlexW2153626652

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.