Evidence map›Paper›PMID 19066337›Full record

ArticleMolecular pharmacology2009

Sphingolipids function as downstream effectors of a fungal PAQR.

Nancy Y Villa, Brian R Kupchak, Ibon Garitaonandia, Jessica L Smith, Emilio Alonso, Charlene Alford, L Ashley Cowart, Yusuf A Hannun, Thomas J Lyons

Open access · bronzeAbstract readComparative Study
In one paragraph

Article in Molecular pharmacology, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 56 papers.

0numbers the graph read from it
0cells of the map it votes in
56citing papers in PubMed
1.8field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

56 citing papers in PubMed, 88 citations in OpenAlex.

  1. Review
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  10. Article
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  12. Lipid Signaling During Gamete Maturation.Frontiers in cell and developmental biology · 2022
    Review
  13. Article
  14. Article
  15. The aetiology and molecular landscape of insulin resistance.Nature reviews. Molecular cell biology · 2021
    Review
  16. Review
  17. Ceramides in Metabolism: Key Lipotoxic Players.Annual review of physiology · 2021
    Review
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Nancy Y VillaDepartment of Chemistry, University of Florida, Gainesville, FL 32611, USA.
Brian R Kupchak
Ibon Garitaonandia
Jessica L Smith
Emilio Alonso
Charlene Alford
L Ashley Cowart
Yusuf A Hannun
Thomas J Lyons
University of Florida · USMedical University of South Carolina · USScripps Research Institute · US

Funding

Modeling and Analysis of Yeast Sphingolipid MetabolismR01GM063265 · NIGMS · STATE UNIVERSITY NEW YORK STONY BROOK · PI HANNUN, YUSUF AWNI · 2001 to 2013
$3.4M
Probing the mechanisms of signal transduction via adiponectin and its receptorsR21DK074812 · NIDDK · UNIVERSITY OF FLORIDA · PI LYONS, THOMAS J · 2006 to 2007
$260k
NIDDK NIH HHS R21 DK074812NIDDK NIH HHS R21-DK074812NIGMS NIH HHS GM63265
6 · The paper itself

Abstract

The Izh2p protein from Saccharomyces cerevisiae belongs to the newly characterized progestin and adipoQ receptor (PAQR) superfamily of receptors whose mechanism of signal transduction is still unknown. Izh2p functions as a receptor for the plant PR-5 defensin osmotin and has pleiotropic effects on cellular biochemistry. One example of this pleiotropy is the Izh2p-dependent repression of FET3, a gene involved in iron-uptake. Although the physiological purpose of FET3 repression by Izh2p is a matter of speculation, it provides a reporter with which to probe the mechanism of signal transduction by this novel class of receptor. Receptors in the PAQR family share sequence similarity with enzymes involved in ceramide metabolism, which led to the hypothesis that sphingolipids are involved in Izh2p-dependent signaling. In this study, we demonstrate that drugs affecting sphingolipid metabolism, such as d-erythro-MAPP and myriocin, inhibit the effect of Izh2p on FET3. We also show that Izh2p causes an increase in steady-state levels of sphingoid base. Moreover, we show that Izh2p-independent increases in sphingoid bases recapitulate the effect of Izh2p on FET3. Finally, our data indicate that the Pkh1p and Pkh2p sphingoid base-sensing kinases are essential components of the Izh2p-dependent signaling pathway. In conclusion, our data indicate that Izh2p produces sphingoid bases and that these bioactive lipids probably function as the second messenger responsible for the effect of Izh2p on FET3.

Indexed as

CeramidesCeruloplasminMembrane ProteinsModels, GeneticSaccharomyces cerevisiae ProteinsSecond Messenger SystemsSphingolipidsCeramidesCeruloplasminFET3 protein, S cerevisiaeIZH2 protein, S cerevisiaeMembrane ProteinsSaccharomyces cerevisiae ProteinsSphingolipids

Identifiers

PMID19066337
PMCPMC2684929
OpenAlexW2145799153

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.