Evidence map›Paper›PMID 19066305›Full record

ArticleThe Journal of clinical endocrinology and metabolism2009

Loss of Rap1GAP in papillary thyroid cancer.

Anoma Nellore, Karolina Paziana, Changqing Ma, Oxana M Tsygankova, Yan Wang, Kanchan Puttaswamy, Ammarah U Iqbal, Susanna R Franks, Yu Lv, Andrea B Troxel and 3 more

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of clinical endocrinology and metabolism, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
2.6field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 46 citations in OpenAlex.

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  5. Downregulation of Rap1GAP Expression Activates the TGF-BioMed research international · 2021
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  20. Inhibitory effects of Rap1GAP overexpression on proliferation and migration of endothelial cells via ERK and Akt pathways.Journal of Huazhong University of Science and Technology. Medical sciences = Hua zhong ke ji da xue xue bao. Yi xue Ying De wen ban = Huazhong keji daxue xuebao. Yixue Yingdewen ban · 2011
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 2 institutions in 2 countries.

Anoma NelloreDepartment of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania 19104, USA.
Karolina Paziana
Changqing Ma
Oxana M Tsygankova
Yan Wang
Kanchan Puttaswamy
Ammarah U Iqbal
Susanna R Franks
Yu Lv
Andrea B Troxel
Michael D Feldman
Judy L Meinkoth
Marcia S Brose
University of Pennsylvania · USCapital Medical University · CN

Funding

SIGNALING CROSSTALK AND THYROID CELL SURVIVALR01DK055757 · NIDDK · UNIVERSITY OF PENNSYLVANIA · PI MEINKOTH, JUDY L · 2000 to 2007
$2.1M
Isozyme specific effects of PKCs in thyroid cellsR01CA109543 · NCI · UNIVERSITY OF PENNSYLVANIA · PI MEINKOTH, JUDY L · 2005 to 2009
$1.2M
NCI NIH HHS CA109543NCI NIH HHS R01 CA109543NIDDK NIH HHS DK55757NIDDK NIH HHS R01 DK055757
6 · The paper itself

Abstract

contextRap1 GTPase-activating protein (GAP) regulates the activity of Rap1, a putative oncogene. We previously reported Rap1GAP was highly expressed in normal human thyroid cells and decreased in five papillary thyroid carcinomas (PTCs).

objectivesTo confirm the significance of these findings, we analyzed Rap1GAP expression in a larger set of benign tumors (adenomas and hyperplastic nodules) and PTCs. We determined whether the presence of the BRAF(V600E) mutation or allelic loss of Rap1GAP related to changes in Rap1GAP protein expression. To determine the consequences of Rap1GAP loss, we targeted Rap1GAP in culture using small interfering RNA. DESIGN, PATIENTS, AND

methodsA highly specific Rap1GAP antibody was applied to sections of 55 human thyroid tissues. Genomic DNA was analyzed for the presence of the BRAF(V600E) mutation, and loss of Rap1GAP. Rap1GAP expression in rat thyroid cells was abolished using small interfering RNA.

resultsWe observed that down-regulation of Rap1GAP in benign lesions and PTCs was common. Rap1GAP expression was more severely decreased in PTCs. Loss of Rap1GAP expression was observed in multiple histological variants of PTCs. Approximately 20% of PTCs and adenomas exhibited allelic loss of Rap1GAP. Loss of Rap1GAP was not associated with the presence of the BRAF(V600E) mutation. In vitro, loss of Rap1GAP was sufficient to increase Rap1 activity in thyroid cells.

conclusionsThese data indicate that loss of Rap1GAP is a frequent event in PTC. The more frequent and greater down-regulation of Rap1GAP in PTCs compared with adenomas suggests a role for Rap1GAP depletion in the progression of human thyroid tumors, possibly through unrestrained Rap activity.

Indexed as

Carcinoma, PapillaryGenotypeGTPase-Activating ProteinsHumansImmunohistochemistryProto-Oncogene Proteins B-rafShelterin ComplexTelomere-Binding ProteinsThyroid NeoplasmsBRAF protein, humanGTPase-Activating ProteinsProto-Oncogene Proteins B-rafRAP1GAP protein, humanShelterin ComplexTelomere-Binding ProteinsTERF2IP protein, human

Identifiers

PMID19066305
PMCPMC2681278
OpenAlexW2101774617

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.