Evidence map›Paper›PMID 19066201›Full record

ArticleNucleic acids research2009

Physical and functional interactions between human mitochondrial single-stranded DNA-binding protein and tumour suppressor p53.

Tuck Seng Wong, Sridharan Rajagopalan, Fiona M Townsley, Stefan M Freund, Miriana Petrovich, David Loakes, Alan R Fersht

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 50 papers.

0numbers the graph read from it
0cells of the map it votes in
50citing papers in PubMed
3.0field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

50 citing papers in PubMed, 98 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
  4. Article
  5. Review
  6. Article
  7. Article
  8. Review
  9. DNA repair and genomic stability in lungs affected by acute injury.Biomedicine & pharmacotherapy = Biomedecine & pharmacotherapie · 2019
    Review
  10. Article
  11. Article
  12. Article
  13. Article
  14. Emerging Roles of p53 Family Members in Glucose Metabolism.International journal of molecular sciences · 2018
    Review
  15. Article
  16. Article
  17. Article
  18. Article
  19. TP53 mutation, mitochondria and cancer.Current opinion in genetics & development · 2016
    Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Tuck Seng WongCentre for Protein Engineering, Medical Research Council, Hills Road, Cambridge CB2 0QH, UK.
Sridharan Rajagopalan
Fiona M Townsley
Stefan M Freund
Miriana Petrovich
David Loakes
Alan R Fersht
Medical Research Council · GBMRC Laboratory of Molecular Biology · GB

Funding

Medical Research Council MC_U105474168
6 · The paper itself

Abstract

Single-stranded DNA-binding proteins (SSB) form a class of proteins that bind preferentially single-stranded DNA with high affinity. They are involved in DNA metabolism in all organisms and serve a vital role in replication, recombination and repair of DNA. In this report, we identify human mitochondrial SSB (HmtSSB) as a novel protein-binding partner of tumour suppressor p53, in mitochondria. It binds to the transactivation domain (residues 1-61) of p53 via an extended binding interface, with dissociation constant of 12.7 (+/- 0.7) microM. Unlike most binding partners reported to date, HmtSSB interacts with both TAD1 (residues 1-40) and TAD2 (residues 41-61) subdomains of p53. HmtSSB enhances intrinsic 3'-5' exonuclease activity of p53, particularly in hydrolysing 8-oxo-7,8-dihydro-2'-deoxyguanosine (8-oxodG) present at 3'-end of DNA. Taken together, our data suggest that p53 is involved in DNA repair within mitochondria during oxidative stress. In addition, we characterize HmtSSB binding to ssDNA and p53 N-terminal domain using various biophysical measurements and we propose binding models for both.

Indexed as

8-Hydroxy-2'-DeoxyguanosineBinding SitesCell Line, TumorDeoxyguanosineDNA-Binding ProteinsDNA-Directed DNA PolymeraseDNA Polymerase gammaDNA, Single-StrandedExodeoxyribonucleasesHumansMitochondrial ProteinsProtein BindingProtein StabilityProtein Structure, TertiaryTemperatureTumor Suppressor Protein p538-Hydroxy-2'-DeoxyguanosineDeoxyguanosineDNA-Binding ProteinsDNA-Directed DNA PolymeraseDNA Polymerase gammaDNA, Single-StrandedExodeoxyribonucleasesMitochondrial ProteinsTumor Suppressor Protein p53

Identifiers

PMID19066201
PMCPMC2632919
OpenAlexW1994089967

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.