Evidence map›Paper›PMID 19064000›Full record

ArticleDNA repair2009

A der(8)t(8;11) chromosome in the Karpas-620 myeloma cell line expresses only cyclin D1: yet both cyclin D1 and MYC are repositioned in close proximity to the 3'IGH enhancer.

Amel Dib, Oleg K Glebov, Yaping Shou, Robert H Singer, W Michael Kuehl

Open access · greenAbstract read
In one paragraph

Article in DNA repair, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact, top 91% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 2 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 1 country.

Amel DibGenetics Branch, Center for Cancer Research, National Cancer Institute, National Institutes of Health, Bethesda, MD 20889-5101, USA.
Oleg K Glebov
Yaping Shou
Robert H Singer
W Michael Kuehl
National Institutes of Health · USAlbert Einstein College of Medicine · USCenter for Cancer Research · US

Funding

Molecular Pathogenesis of Multiple MyelomaZIASC006581 · NCI · DIVISION OF CLINICAL SCIENCES - NCI · PI KUEHL, WALTER · 2009 to 2015
$4.5M
Genomic Rearrangements in Multiple MyelomaZIABC010910 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI KUEHL, WALTER · 2009 to 2015
$3.8M
MOLECULAR PATHOGENESIS OF MULTIPLE MYELOMAZ01SC006581 · SC · DIVISION OF CLINICAL SCIENCES - NCI · PI KUEHL, WALTER MICHAEL · 1996 to 2008
$2.7M
SINGLE RNA MOLECULE MOVEMENT VISUALIZED IN LIVING CELLSR01EB002060 · NIBIB · YESHIVA UNIVERSITY · PI SINGER, ROBERT H · 2003 to 2008
$2.0M
Intramural NIH HHS Z01 SC006581NCI NIH HHS CA83208NIBIB NIH HHS EB2060NIBIB NIH HHS R01 EB002060
6 · The paper itself

Abstract

The Karpas-620 human myeloma cell line (HMCL) expresses high levels of Cyclin D1 (CCND1), but has a der(8)t(8;11) and a der(14)t(8;14), and not a conventional t(11;14). Fluorescent in situ hybridization (FISH) and array comparative genomic hybridization (aCGH) studies suggest that der(14)t(11;14) from a primary translocation underwent a secondary translocation with chromosome 8 to generate der(8)t(8;[14];11) and der(14)t(8;[11];14). Both secondary derivatives share extensive identical sequences from chromosomes 8, 11, and 14, including MYC and the 3' IgH enhancers. Der(14), with MYC located approximately 700 kb telomeric to the 3'IGH enhancer, expresses MYC. By contrast, der(8), with both CCND1 and MYC repositioned near a 3'IGH enhancer, expresses CCND1, which is telomeric of the enhancer, but not MYC, which is centromeric to the enhancer. The secondary translocation that dysregulated MYC resulted in extensive regions from both donor chromosomes being transmitted to both derivative chromosomes, suggesting a defect in DNA recombination or repair in the myeloma tumor cell.

Indexed as

Cell Line, TumorEnhancer Elements, GeneticMultiple MyelomaTranslocation, GeneticAnimalsChromosomes, Human, Pair 11Chromosomes, Human, Pair 8Comparative Genomic HybridizationCyclin D1Gene DosageHumansIn Situ Hybridization, FluorescenceMiceProto-Oncogene Proteins c-mycRNACyclin D1MYC protein, humanProto-Oncogene Proteins c-mycRNA

Identifiers

PMID19064000
PMCPMC2678939
OpenAlexW1993856459

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.