Evidence map›Paper›PMID 19060204›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2008

Efficient transposition of the Tol2 transposable element from a single-copy donor in zebrafish.

Akihiro Urasaki, Kazuhide Asakawa, Koichi Kawakami

Open access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed
1.9field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed, 67 citations in OpenAlex.

  1. Article
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  13. Color opponency with a single kind of bistable opsin in the zebrafish pineal organ.Proceedings of the National Academy of Sciences of the United States of America · 2018
    Article
  14. Article
  15. Article
  16. Review
  17. Imaging Subcellular Structures in the Living Zebrafish Embryo.Journal of visualized experiments : JoVE · 2016
    Article
  18. Article
  19. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Akihiro UrasakiDivision of Molecular and Developmental Biology, National Institute of Genetics, and Department of Genetics, Graduate University for Advanced Studies (SOKENDAI), Mishima, Shizuoka 411-8540, Japan.
Kazuhide Asakawa
Koichi Kawakami
National Institute of Genetics · JPThe Graduate University for Advanced Studies, SOKENDAI · JP

Funding

Genetic methods using the Tol2 transposable elementR01GM069382 · NIGMS · NATIONAL INSTITUTE OF GENETICS · PI KAWAKAMI, KOICHI · 2003 to 2006
$902k
NIGMS NIH HHS R01 GM069382NIGMS NIH HHS R01GM069382
6 · The paper itself

Abstract

The Tol2 transposable element is a powerful genetic tool in model vertebrates and has been used for transgenesis, insertional mutagenesis, gene trapping, and enhancer trapping. However, an in vivo transposition system using Tol2 has not yet been developed. Here we report the in vivo Tol2 transposition system in a model vertebrate, zebrafish. First, we constructed transgenic zebrafish that carried single-copy integrations of Tol2 on the genome and injected transposase mRNA into one-cell stage embryos. The Tol2 insertions were mobilized efficiently in the germ lineage. We then mobilized an insertion of the Tol2 gene trap construct in the nup214 gene, which caused a recessive lethal mutant phenotype, and demonstrated that this method is applicable to the isolation of revertants from a transposon insertional mutant. Second, we constructed transgenic fish carrying the transposase cDNA under the control of the hsp70 promoter. Double-transgenic fish containing the transposase gene and a single-copy Tol2 insertion were treated with heat shock at the adult stage. We found that transposition can be induced efficiently in the male germ cells. We analyzed new integration sites and found that the majority (83%) of them were mapped on chromosomes other than the transposon donor chromosomes and that 9% of local hopping events mapped less than 300 kb away from the donor loci. Our present study demonstrates that the in vivo Tol2 transposition system is useful for creating genome-wide insertions from a single-copy donor and should facilitate functional genomics and transposon biology in vertebrates.

Indexed as

AnimalsAnimals, Genetically ModifiedBase SequenceDNA Transposable ElementsEmbryo, NonmammalianFemaleGerm CellsHSP70 Heat-Shock ProteinsMaleMicroinjectionsMolecular Sequence DataMutagenesis, InsertionalPromoter Regions, GeneticTransposasesZebrafishDNA Transposable ElementsHSP70 Heat-Shock ProteinsTransposases

Identifiers

PMID19060204
PMCPMC2604973
OpenAlexW2057062357

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.