Evidence map›Paper›PMID 19056684›Full record

ArticleMolecular biology of the cell2009

Stwl modifies chromatin compaction and is required to maintain DNA integrity in the presence of perturbed DNA replication.

Xia Yi, Hilda I de Vries, Katarzyna Siudeja, Anil Rana, Willy Lemstra, Jeanette F Brunsting, Rob M Kok, Yvo M Smulders, Matthias Schaefer, Freark Dijk and 4 more

Open access · greenAbstract read
In one paragraph

Article in Molecular biology of the cell, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
0.1field-weighted citation impact, top 44% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 27 citations in OpenAlex.

  1. Article
  2. A nuclear architecture screen inGenes & development · 2024
    Article
  3. Article
  4. bioRxiv : the preprint server for biology · 2024
    Article
  5. A nuclear architecture screen inbioRxiv : the preprint server for biology · 2023
    Article
  6. Genetic and Epigenetic Regulation ofJournal of developmental biology · 2023
    Review
  7. Article
  8. Article
  9. Article
  10. Replication fork stalling elicits chromatin compaction for the stability of stalling replication forks.Proceedings of the National Academy of Sciences of the United States of America · 2019
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 5 institutions in 3 countries.

Xia YiDepartment of Radiation and Stress Cell Biology, Division of Cell Biology, University Medical Center Groningen, University of Groningen, 9713 AV Groningen, The Netherlands.
Hilda I de Vries
Katarzyna Siudeja
Anil Rana
Willy Lemstra
Jeanette F Brunsting
Rob M Kok
Yvo M Smulders
Matthias Schaefer
Freark Dijk
Yongfeng Shang
Bart J L Eggen
Harm H Kampinga
Ody C M Sibon
University Medical Center Groningen · NLAmsterdam UMC Location Vrije Universiteit Amsterdam · NLGerman Cancer Research Center · DEPeking University · CNUniversity of Groningen · NL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Hydroxyurea, a well-known DNA replication inhibitor, induces cell cycle arrest and intact checkpoint functions are required to survive DNA replication stress induced by this genotoxic agent. Perturbed DNA synthesis also results in elevated levels of DNA damage. It is unclear how organisms prevent accumulation of this type of DNA damage that coincides with hampered DNA synthesis. Here, we report the identification of stonewall (stwl) as a novel hydroxyurea-hypersensitive mutant. We demonstrate that Stwl is required to prevent accumulation of DNA damage induced by hydroxyurea; yet, Stwl is not involved in S/M checkpoint regulation. We show that Stwl is a heterochromatin-associated protein with transcription-repressing capacities. In stwl mutants, levels of trimethylated H3K27 and H3K9 (two hallmarks of silent chromatin) are decreased. Our data provide evidence for a Stwl-dependent epigenetic mechanism that is involved in the maintenance of the normal balance between euchromatin and heterochromatin and that is required to prevent accumulation of DNA damage in the presence of DNA replication stress.

Indexed as

DNA ReplicationAnimalsCheckpoint Kinase 1ChromatinChromosomal Position EffectsChromosomal Proteins, Non-HistoneDNADNA-Binding ProteinsDNA MethylationDrosophila melanogasterDrosophila ProteinsFemaleGenes, SuppressorHeterochromatinHistonesHydroxyureaCheckpoint Kinase 1ChromatinChromosomal Proteins, Non-HistoneDNADNA-Binding ProteinsDrosophila ProteinsHeterochromatinheterochromatin protein 1, DrosophilaHistonesHydroxyureaLysineProtein Kinasesstwl protein, DrosophilaTranscription Factors

Identifiers

PMID19056684
PMCPMC2633405
OpenAlexW2104566967

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.