Evidence map›Paper›PMID 19053233›Full record

ArticleBiochemistry2008

Residues accessible in the binding-site crevice of transmembrane helix 6 of the CB2 cannabinoid receptor.

Ntsang M Nebane, Dow P Hurst, Carl A Carrasquer, Zhuanhong Qiao, Patricia H Reggio, Zhao-Hui Song

Open access · greenAbstract read
In one paragraph

Article in Biochemistry, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
2.7field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 25 citations in OpenAlex.

  1. Article
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  4. Review
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  15. Article
  16. Review
  17. Understanding functional residues of the cannabinoid CB1.Current topics in medicinal chemistry · 2010
    Review
  18. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Ntsang M NebaneDepartment of Pharmacology and Toxicology, University of Louisville School of Medicine, Louisville, Kentucky 40292, USA.
Dow P Hurst
Carl A Carrasquer
Zhuanhong Qiao
Patricia H Reggio
Zhao-Hui Song
University of Louisville · USUniversity of North Carolina at Greensboro · US

Funding

Molecular Determinants of Cannabinoid ActivityR01DA003934 · NIDA · UNIVERSITY OF NORTH CAROLINA GREENSBORO · PI REGGIO, PATRICIA HODAPP · 1985 to 2019
$5.6M
Cannabinoid Receptors and Novel Antiglaucoma DrugsR01EY013632 · NEI · UNIVERSITY OF LOUISVILLE · PI SONG, ZHAO-HUI · 2003 to 2010
$1.9M
Structure and Function of CB2 Cannabinoid ReceptorR01DA011551 · NIDA · UNIVERSITY OF LOUISVILLE · PI SONG, ZHAO-HUI · 2004 to 2008
$1.3M
Senior Scientist Award: Molecular Determinants for Cannabinoid ActivityK05DA021358 · NIDA · UNIVERSITY OF NORTH CAROLINA GREENSBORO · PI REGGIO, PATRICIA HODAPP · 2007 to 2016
$1.3M
STRUCTURE/FUNCTION OF CB2 CANNABINOID RECEPTORR29DA011551 · NIDA · UNIVERSITY OF LOUISVILLE · PI SONG, ZHAO-HUI · 1998 to 2002
$307k
NEI NIH HHS EY13632NEI NIH HHS R01 EY013632NIDA NIH HHS DA03934NIDA NIH HHS DA11551NIDA NIH HHS K05 DA021358NIDA NIH HHS KO5 DA021358NIDA NIH HHS R01 DA003934NIDA NIH HHS R01 DA011551NIDA NIH HHS R29 DA011551
6 · The paper itself

Abstract

We have used the substituted-cysteine accessibility method (SCAM) to map the residues in the sixth membrane-spanning segment of the CB2 cannabinoid receptor that contribute to the surface of the water-accessible binding-site crevice. Using a background of the mutant C2.59S which is relatively insensitive to the methanethiosulfonate (MTS) reagents, we mutated to cysteine, one at a time, 34 consecutive residues in TMH6 of the CB2 receptor. These mutant receptors were then expressed in HEK293 cells. By incubating HEK293 cells stably transfected with CB2 receptors with the small, charged, hydrophilic, thiol-specific reagent methanethiosulfonate ethylammonium (MTSEA), [(3)H]CP55940 binding was significantly inhibited for six mutant receptors. All six of the mutants that reacted with MTSEA were protected from the reaction when pretreated with the cannabinoid agonist WIN55212-2, suggesting that MTSEA modification occurred within the binding crevice. Therefore, the side chains of the residues at these reactive loci (V6.51, L6.52, L6.54, M6.55, L6.59, and T6.62) are on the water-accessible surface of the binding-site crevice. These residues are extracellular to the TMH6 CWXP hinge motif. The pattern of accessibility is consistent with a alpha-helical conformation for this segment of TMH6. Molecular modeling studies performed in the context of the CB2 model show that V6.51, L6.52, L6.54, M6.55, L6.59, and T6.62 face into the CB2 binding pocket, further confirming our SCAM results. These results are similar to the accessibility patterns determined by SCAM studies of TMH6 in the opioid and dopamine D2 receptors.

Indexed as

Binding SitesAmino AcidsCell LineHumansModels, MolecularMutagenesis, Site-DirectedMutation, MissenseProtein Structure, SecondaryReceptor, Cannabinoid, CB2WaterAmino AcidsReceptor, Cannabinoid, CB2Water

Identifiers

PMID19053233
PMCPMC4791095
OpenAlexW1977911606

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.