Evidence map›Paper›PMID 19052151›Full record

ArticlePlant physiology2009

GNOM-mediated vesicular trafficking plays an essential role in hydrotropism of Arabidopsis roots.

Yutaka Miyazawa, Akiko Takahashi, Akie Kobayashi, Tomoko Kaneyasu, Nobuharu Fujii, Hideyuki Takahashi

Open access · hybridAbstract read
In one paragraph

Article in Plant physiology, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 35 papers.

0numbers the graph read from it
0cells of the map it votes in
35citing papers in PubMed
8.2field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

35 citing papers in PubMed, 116 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Review
  5. Article
  6. Article
  7. Don't be MIZguided, know where to grow!Communications biology · 2024
    Article
  8. Review
  9. Article
  10. Article
  11. Review
  12. Article
  13. Review
  14. Article
  15. Review
  16. Article
  17. Root Plasticity in the Pursuit of Water.Plants (Basel, Switzerland) · 2019
    Review
  18. Review
  19. MIZ1 regulates ECA1 to generate a slow, long-distance phloem-transmitted CaProceedings of the National Academy of Sciences of the United States of America · 2018
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Yutaka MiyazawaGraduate School of Life Sciences, Tohoku University, Sendai 980-8577, Japan.
Akiko Takahashi
Akie Kobayashi
Tomoko Kaneyasu
Nobuharu Fujii
Hideyuki Takahashi
Tohoku University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Roots respond not only to gravity but also to moisture gradient by displaying gravitropism and hydrotropism, respectively, to control their growth orientation, which helps plants obtain water and become established in the terrestrial environment. As gravitropism often interferes with hydrotropism, however, the mechanisms of how roots display hydrotropism and differentiate it from gravitropism are not understood. We previously reported MIZU-KUSSEI1 (MIZ1) as a gene required for hydrotropism but not for gravitropism, although the function of its protein was not known. Here, we found that a mutation of GNOM encoding guanine-nucleotide exchange factor for ADP-ribosylation factor-type G proteins was responsible for the ahydrotropism of Arabidopsis (Arabidopsis thaliana), miz2. Unlike other gnom alleles, miz2 showed no apparent morphological defects or reduced gravitropism. Instead, brefeldin A (BFA) treatment inhibited both hydrotropism and gravitropism in Arabidopsis roots. In addition, a BFA-resistant GNOM variant, GNM696L, showed normal hydrotropic response in the presence of BFA. Furthermore, a weak gnom allele, gnomB/E, showed defect in hydrotropic response. These results indicate that GNOM-mediated vesicular trafficking plays an essential role in hydrotropism of seedling roots.

Indexed as

Amino Acid SequenceArabidopsisArabidopsis ProteinsCloning, MolecularGenetic VariationGravitropismGuanine Nucleotide Exchange FactorsMolecular Sequence DataPlant RootsSeedlingsSequence AlignmentTropismWaterArabidopsis ProteinsGNOM protein, ArabidopsisGuanine Nucleotide Exchange Factorsmizu-kussei1 protein, ArabidopsisWater

Identifiers

PMID19052151
PMCPMC2633850
OpenAlexW2152625817

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.