Evidence map›Paper›PMID 19050847›Full record

ArticleTAG. Theoretical and applied genetics. Theoretische und angewandte Genetik2009

Molecular mapping in oil radish (Raphanus sativus L.) and QTL analysis of resistance against beet cyst nematode (Heterodera schachtii).

Holger Budahn, Herbert Peterka, Magdi Ali Ahmed Mousa, Yunhua Ding, Shaosong Zhang, Jinbin Li

Abstract read
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In one paragraph

Article in TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
1.3field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 47 citations in OpenAlex.

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  8. Construction of a reference genetic map of Raphanus sativus based on genotyping by whole-genome resequencing.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2015
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  9. Review
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  15. Genetic linkage map construction and QTL mapping of cadmium accumulation in radish (Raphanus sativus L.).TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2012
    Article
  16. Article
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  19. An EST-SSR linkage map of Raphanus sativus and comparative genomics of the Brassicaceae.DNA research : an international journal for rapid publication of reports on genes and genomes · 2011
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 5 institutions in 3 countries.

Holger BudahnJulius Kühn Institute, Institute for Breeding Research on Horticultural and Fruit Crops, Erwin-Baur-Strasse 27, 06484 Quedlinburg, Germany. holger.budahn@jki.bund.de
Herbert Peterka
Magdi Ali Ahmed Mousa
Yunhua Ding
Shaosong Zhang
Jinbin Li
Julius Kühn-Institut · DEAssiut University · EGBeijing Academy of Agricultural and Forestry Sciences · CNBiotechnology Research Institute · CNYunnan Academy of Agricultural Sciences · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The beet cyst nematode (Heterodera schachtii Schmidt) can be controlled biologically in highly infected soils of sugar beet rotations using resistant varieties of oil radish (Raphanus sativus L. ssp. oleiferus DC.) as a green crop. Resistant plants stimulate infective juveniles to invade roots, but prevent them after their penetration to complete the life cycle. The resistance trait has been transferred successfully to susceptible rapeseed by the addition of a complete radish chromosome. The aim of the study was to construct a genetic map for radish and to develop resistance-associated markers. The map with 545 RAPD, dpRAPD, AFLP and SSR markers had a length of 1,517 cM, a mean distance of 2.8 cM and consisted of nine linkage groups having sizes between 120 and 232 cM. Chromosome-specific markers for the resistance-bearing chromosome d and the other eight radish chromosomes, developed previously from a series of rapeseed-radish addition lines, were enclosed as anchor markers. Each of the extra chromosomes in the addition lines could be unambiguously assigned to one of the radish linkage groups. The QTL analysis of nematode resistance was realized in the intraspecific F(2) mapping population derived from a cross between varieties 'Pegletta' (nematode resistant) x 'Siletta Nova' (susceptible). A dominant major QTL Hs1( Rph ) explaining 46.4% of the phenotypic variability was detected in a proximal position of chromosome d. Radish chromosome-specific anchor markers with known map positions were made available for future recombination experiments to incorporate segments carrying desired genes as Hs1( Rph ) from radish into rapeseed by means of chromosome addition lines.

Indexed as

Chromosome MappingAmplified Fragment Length Polymorphism AnalysisAnimalsCrosses, GeneticGenetic MarkersImmunity, InnateLod ScoreMinisatellite RepeatsPlant DiseasesQuantitative Trait LociRandom Amplified Polymorphic DNA TechniqueRaphanusTylenchoideaGenetic Markers

Identifiers

PMID19050847
OpenAlexW1967226650

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.