Evidence map›Paper›PMID 19050254›Full record

ArticleJournal of immunology (Baltimore, Md. : 1950)2008

T-bet dependent removal of Sin3A-histone deacetylase complexes at the Ifng locus drives Th1 differentiation.

Shaojing Chang, Patrick L Collins, Thomas M Aune

Open access · bronzeAbstract read
In one paragraph

Article in Journal of immunology (Baltimore, Md. : 1950), 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
1.1field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed, 50 citations in OpenAlex.

  1. Modulating effects of heat-killed and liveThe veterinary quarterly · 2024
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  9. Epigenetic Reprogramming of CD4Frontiers in immunology · 2021
    Review
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  19. Review
  20. Transcriptional regulatory networks for CD4 T cell differentiation.Current topics in microbiology and immunology · 2014
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Shaojing ChangDepartment of Medicine, Division of Rheumatology, Vanderbilt University School of Medicine, Nashville, TN 37232, USA.
Patrick L Collins
Thomas M Aune
Center for Rheumatology · USVanderbilt University · US

Funding

Immunobiology of Blood and Vascular Systems Training ProgramT32HL069765 · NHLBI · VANDERBILT UNIVERSITY · PI HAWIGER, JACK J · 2002 to 2016
$6.5M
IFN GAMMA GENE REGULATION IN T CELLS AND NK CELLSR01AI044924 · NIAID · VANDERBILT UNIVERSITY MEDICAL CENTER · PI AUNE, THOMAS M. · 2000 to 2019
$5.8M
NHLBI NIH HHS T32 HL069765NIAID NIH HHS R01 AI 044924NIAID NIH HHS R01 AI044924
6 · The paper itself

Abstract

Forming and removing epigenetic histone marks at gene loci are central processes in differentiation. Here, we explored mechanisms establishing long-range H4 acetylation marks at the Ifng locus during Th1 lineage commitment. In Th0 cells, histone deacetylase (HDAC)-Sin3A complexes recruited to the Ifng locus actively prevented accumulation of H4 acetylation marks. Th1 differentiation caused loss of HDAC-Sin3A complexes by T-bet-dependent mechanisms and accumulation of H4 acetylation marks. HDAC-Sin3A complexes were absent from the locus in NOD Th0 cells, obviating the need for Th1 differentiation signals to establish histone marks and Th1 differentiation. Thus, Ifng transcription is actively prevented in Th0 cells via epigenetic mechanisms and epigenetic defects allow unregulated Ifng transcription that may contribute to autoimmunity.

Indexed as

Histone Deacetylase InhibitorsAcetylationAnimalsCell DifferentiationCell ProliferationCells, CulturedHistone AcetyltransferasesHistone DeacetylasesHistonesInterferon-gammaMiceMice, Inbred C57BLMice, Inbred NODMice, KnockoutProtein TransportRepressor ProteinsHistone AcetyltransferasesHistone Deacetylase InhibitorsHistone DeacetylasesHistonesInterferon-gammaRepressor ProteinsSIN3A transcription factorSin3 Histone Deacetylase and Corepressor ComplexT-bet Transcription FactorT-Box Domain Proteins

Identifiers

PMID19050254
PMCPMC2794428
OpenAlexW2163263549

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.