Evidence map›Paper›PMID 19043822›Full record

ArticleJournal of neurovirology2009

JC virus VP1 loop-specific polymorphisms are associated with favorable prognosis for progressive multifocal leukoencephalopathy.

Serena Delbue, Emanuela Branchetti, Simone Bertolacci, Eleonora Tavazzi, Enrico Marchioni, Renato Maserati, Giulia Minnucci, Sara Tremolada, GianLuca Vago, Pasquale Ferrante

Open access · greenAbstract read
In one paragraph

Article in Journal of neurovirology, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
1.6field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 34 citations in OpenAlex.

  1. Review
  2. Unraveling the complexities of neurotropic virus infection and immune evasion.Microbiology and molecular biology reviews : MMBR · 2025
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 2 countries.

Serena DelbueLaboratory of Molecular Virology, Department of Biomedical Science and Technology, University of Milan, Milan, Italy.
Emanuela Branchetti
Simone Bertolacci
Eleonora Tavazzi
Enrico Marchioni
Renato Maserati
Giulia Minnucci
Sara Tremolada
GianLuca Vago
Pasquale Ferrante
University of Milan · ITIstituti di Ricovero e Cura a Carattere Scientifico · ITLuigi Sacco Hospital · ITSaint Joseph Hospital · US

Funding

Pathogenesis of leukoencephalopathies in HIV+ patientsR01MH072528 · NIMH · SAINT JOSEPH HOSPITAL · PI FERRANTE, PASQUALE · 2005 to 2009
$1.2M
NIMH NIH HHS MH 072528NIMH NIH HHS R01 MH072528
6 · The paper itself

Abstract

JC virus (JCV) is a human polyomavirus that causes progressive multifocal leukoencephalopathy (PML), a fatal demyelinating disease that mainly affects immunocompromised subjects. Since its discovery, PML has been considered a rapidly progressing fatal disease; however, amino acid substitutions in the capsid viral protein have recently been tentatively associated with changes in PML clinical course. In order to provide more insight to PML pathogenesis and identify potential prognostic markers, seven cerebrospinal fluid (CSF) samples and four brain autopsy samples were collected from patients afflicted with PML with different clinical courses (fast- and slow-progressing), and the JCV VP1 coding region was amplified, cloned, and sequenced. In addition, urine samples were collected and analyzed from nine patients with PML or other neurological diseases (ONDs) as a control group. Sequencing analysis of the genomic region encoding the VP1 outer loops revealed polymorphic residues restricted to four positions (74, 75, 117, and 128) in patients with slow PML progression, whereas no significant mutation was found in JCV isolated from urine. Collectively, these data show that JCV VP1 loop mutations are associated with a favorable prognosis for PML. It is therefore possible that slower progression of PML may be related to the emergence of a less virulent JCV strain with a lower replication rate.

Indexed as

AdultAgedAmino Acid SubstitutionBrainCapsid ProteinsFemaleHumansJC VirusLeukoencephalopathy, Progressive MultifocalMaleMiddle AgedPolymorphism, GeneticPrognosisCapsid ProteinsVP1 protein, polyomavirus

Identifiers

PMID19043822
PMCPMC2678919
OpenAlexW2115673743

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.