Evidence map›Paper›PMID 19037728›Full record

ArticlePlant molecular biology2009

A protein related to prokaryotic UMP kinases is involved in psaA/B transcript accumulation in Arabidopsis.

Paul Hein, Jana Stöckel, Stefan Bennewitz, Ralf Oelmüller

Abstract read
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In one paragraph

Article in Plant molecular biology, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
0.3field-weighted citation impact, top 41% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 17 citations in OpenAlex.

  1. Article
  2. Genetic mapping of green curd gene Gr in cauliflower.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2020
    Article
  3. Article
  4. UMP Kinase Regulates Chloroplast Development and Cold Response in Rice.International journal of molecular sciences · 2019
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 2 countries.

Paul HeinInstitute of General Botany and Plant Physiology, Friedrich-Schiller-Universität Jena, Dornburgerstr. 159, 07743, Jena, Germany.
Jana Stöckel
Stefan Bennewitz
Ralf Oelmüller
Friedrich Schiller University Jena · DEWashington University in St. Louis · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Dpt1 (defect in p saA/B transcript accumulation 1) is a novel photosystem (PS) I mutant in Arabidopsis. dpt1 mutants fail to grow photoautotrophically, and are impaired in the accumulation of psaA/B transcripts while the transcript levels for the remaining PSI subunits, for subunits of the PSII, the cyt-b ( 6 )/f-complex, and the ribulose-1,5-bisphosphate carboxylase are comparable to the wild type. In-organello run-on transcription assays demonstrate that the lower psaA/B transcript abundance in dpt1-1 is not caused by the inability to transcribe the psaA/psaB/rps14 operon. psaA/B transcripts in the mutant are associated with polyribosomes and translated. Thus, the mutation affects post-transcriptional processes specific for psaA/B. The dpt1 gene was isolated by map-based cloning. The protein is localized in the stroma of the chloroplast and exhibits striking similarities to UMP kinases of prokaryotic origin. Our results show that the nuclear encoded protein Dpt1 is essential for retaining photosynthetic activity in higher plant chloroplasts and involved in post-transcriptional steps of psaA/B transcript accumulation. We discuss that Dpt1 may be a bifunctional protein that couples the pyrimidine metabolism to the photosynthetic electron transport.

Indexed as

Amino Acid SequenceArabidopsisArabidopsis ProteinsGene Expression ProfilingGene Expression Regulation, PlantMolecular Sequence DataMutationNucleoside-Phosphate KinasePhenotypePhotosystem I Protein ComplexPlastidsPolyribosomesProkaryotic CellsProtein TransportRNA, MessengerSeedlingsArabidopsis ProteinsDpt1 protein, ArabidopsisNucleoside-Phosphate KinasePhotosystem I Protein Complexphotosystem I, psaB subunitRNA, Messengeruridine monophosphate kinase

Identifiers

PMID19037728
OpenAlexW1965886818

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.