Evidence map›Paper›PMID 19036786›Full record

ArticleNucleic acids research2009

Function and ribosomal localization of aIF6, a translational regulator shared by archaea and eukarya.

Dario Benelli, Stefano Marzi, Carmine Mancone, Tonino Alonzi, Anna la Teana, Paola Londei

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
1.7field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 46 citations in OpenAlex.

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  14. Translation initiation: variations in the mechanism can be anticipated.Cellular and molecular life sciences : CMLS · 2011
    Review
  15. The biological roles of ITGB4BP and its potential effect on fibrosis.International journal of burns and trauma · 2011
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 3 countries.

Dario BenelliDipartimento Biotecnologie Cellulari ed Ematologia, Policlinico Umberto I, Università di Roma Sapienza, Roma, Italy.
Stefano Marzi
Carmine Mancone
Tonino Alonzi
Anna la Teana
Paola Londei
Marche Polytechnic University · ITCenter for Prevention and Treatment of Infections · USCentre National de la Recherche Scientifique · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The translation factor IF6 is shared by the Archaea and the Eukarya, but is not found in Bacteria. The properties of eukaryal IF6 (eIF6) have been extensively studied, but remain somewhat elusive. eIF6 behaves as a ribosome-anti-association factor and is involved in miRNA-mediated gene silencing; however, it also seems to participate in ribosome synthesis and export. Here we have determined the function and ribosomal localization of the archaeal (Sulfolobus solfataricus) IF6 homologue (aIF6). We find that aIF6 binds specifically to the 50S ribosomal subunits, hindering the formation of 70S ribosomes and strongly inhibiting translation. aIF6 is uniformly expressed along the cell cycle, but it is upregulated following both cold- and heat shock. The aIF6 ribosomal binding site lies in the middle of the 30-S interacting surface of the 50S subunit, including a number of critical RNA and protein determinants involved in subunit association. The data suggest that the IF6 protein evolved in the archaeal-eukaryal lineage to modulate translational efficiency under unfavourable environmental conditions, perhaps acquiring additional functions during eukaryotic evolution.

Indexed as

Protein BiosynthesisArchaeal ProteinsBase SequenceBinding SitesCell CycleCloning, MolecularEukaryotic Initiation FactorsModels, MolecularMolecular Sequence DataProkaryotic Initiation FactorsRibosomal ProteinsRibosomesRibosome Subunits, Large, ArchaealRNA, Ribosomal, 23SSulfolobus solfataricusArchaeal ProteinsEukaryotic Initiation FactorsProkaryotic Initiation Factorsribosomal protein L14Ribosomal ProteinsRNA, Ribosomal, 23S

Identifiers

PMID19036786
PMCPMC2615626
OpenAlexW1970723999

What OpenQuestion holds

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LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.