Evidence map›Paper›PMID 19036170›Full record

ArticleBMC biochemistry2008

Modification of carbonic anhydrase II with acetaldehyde, the first metabolite of ethanol, leads to decreased enzyme activity.

Fatemeh Bootorabi, Janne Jänis, Jarkko Valjakka, Sari Isoniemi, Pirjo Vainiotalo, Daniela Vullo, Claudiu T Supuran, Abdul Waheed, William S Sly, Onni Niemelä and 1 more

Open access · hybridAbstract read
In one paragraph

Article in BMC biochemistry, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.6field-weighted citation impact, top 33% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 22 citations in OpenAlex.

  1. It's a Gas: Bioconjugation With Vapor-Phase Reagents.Chemistry (Weinheim an der Bergstrasse, Germany) · 2026
    Review
  2. Article
  3. Carbonic anhydrase modification for carbon management.Environmental science and pollution research international · 2020
    Article
  4. Article
  5. Review
  6. Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 4 institutions in 3 countries.

Fatemeh BootorabiInstitute of Medical Technology, Tampere University Hospital, 33520 Tampere, Finland. fatemeh.ahmad@uta.fi
Janne Jänis
Jarkko Valjakka
Sari Isoniemi
Pirjo Vainiotalo
Daniela Vullo
Claudiu T Supuran
Abdul Waheed
William S Sly
Onni Niemelä
Seppo Parkkila
Tampere University · FISaint Louis University · USUniversity of Florence · ITTampere University Hospital · FI

Funding

BIOCHEMICAL GENETICS OF CARBONIC ANHYDRASE DEFICIENCIESR01DK040163 · NIDDK · SAINT LOUIS UNIVERSITY · PI SLY, WILLIAM S · 1988 to 2008
$4.3M
NIDDK NIH HHS R01 DK040163
6 · The paper itself

Abstract

backgroundAcetaldehyde, the first metabolite of ethanol, can generate covalent modifications of proteins and cellular constituents. However, functional consequences of such modification remain poorly defined. In the present study, we examined acetaldehyde reaction with human carbonic anhydrase (CA) isozyme II, which has several features that make it a suitable target protein: It is widely expressed, its enzymatic activity can be monitored, its structural and catalytic properties are known, and it contains 24 lysine residues, which are accessible sites for aldehyde reaction.

resultsAcetaldehyde treatment in the absence and presence of a reducing agent (NaBH3(CN)) caused shifts in the pI values of CA II. SDS-PAGE indicated a shift toward a slightly higher molecular mass. High-resolution mass spectra of CA II, measured with and without NaBH3(CN), indicated the presence of an unmodified protein, as expected. Mass spectra of CA II treated with acetaldehyde revealed a modified protein form (+26 Da), consistent with a "Schiff base" formation between acetaldehyde and one of the primary NH2 groups (e.g., in lysine side chain) in the protein structure. This reaction was highly specific, given the relative abundance of over 90% of the modified protein. In reducing conditions, each CA II molecule had reacted with 9-19 (14 on average) acetaldehyde molecules (+28 Da), consistent with further reduction of the "Schiff bases" to substituted amines (N-ethyllysine residues). The acetaldehyde-modified protein showed decreased CA enzymatic activity.

conclusionThe acetaldehyde-derived modifications in CA II molecule may have physiological consequences in alcoholic patients.

Indexed as

AcetaldehydeCarbonic Anhydrase IIElectrophoresis, Polyacrylamide GelEthanolHumansIsoelectric FocusingKineticsSpectrometry, Mass, Electrospray IonizationAcetaldehydeCarbonic Anhydrase IIEthanol

Identifiers

PMID19036170
PMCPMC2605449
OpenAlexW2069584306

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.