Evidence map›Paper›PMID 19035517›Full record

ArticleThe Prostate2009

Genome-wide linkage scan for prostate cancer susceptibility from the University of Michigan Prostate Cancer Genetics Project: suggestive evidence for linkage at 16q23.

Ethan M Lange, Jennifer L Beebe-Dimmer, Anna M Ray, Kimberly A Zuhlke, Jaclyn Ellis, Yunfei Wang, Sarah Walters, Kathleen A Cooney

Open access · greenAbstract read
In one paragraph

Article in The Prostate, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
2.7field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 32 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Alteration of WWOX in human cancer: a clinical view.Experimental biology and medicine (Maywood, N.J.) · 2015
    Review
  7. Article
  8. A genome-wide association study of overall survival in pancreatic cancer patients treated with gemcitabine in CALGB 80303.Clinical cancer research : an official journal of the American Association for Cancer Research · 2012
    Article
  9. Germline mutations in HOXB13 and prostate-cancer risk.The New England journal of medicine · 2012
    Article
  10. Article
  11. Review
  12. Article
  13. The genetics of cancer risk.Cancer journal (Sudbury, Mass.)
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

Ethan M LangeDepartment of Genetics, University of North Carolina, Chapel Hill, USA.
Jennifer L Beebe-Dimmer
Anna M Ray
Kimberly A Zuhlke
Jaclyn Ellis
Yunfei Wang
Sarah Walters
Kathleen A Cooney
University of Michigan–Ann Arbor · USUniversity of North Carolina at Chapel Hill · USWayne State University · US

Funding

GENETIC ANALYSIS OF HEREDITARY PROSTATE CANCER FAMILIESR01CA079596 · NCI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI COONEY, KATHLEEN A · 1999 to 2009
$3.0M
Genetic Susceptibility to Cancers of the Prostate and Urinary BladderK07CA127214 · NCI · WAYNE STATE UNIVERSITY · PI BEEBE-DIMMER, JENNIFER L · 2008 to 2012
$758k
NCI NIH HHS K07 CA127214NCI NIH HHS R01 CA079596NCI NIH HHS R01 CA79596
6 · The paper itself

Abstract

backgroundProstate cancer linkage studies have been used to localize rare and presumably highly penetrant cancer susceptibility genes. Underlying genetic heterogeneity, as well as the high sporadic background of the disease, has resulted in many signals that are often not reproducible between research studies.

methodsWe conducted a SNP-based genome wide linkage scan on 131 Caucasian prostate cancer families participating in the University of Michigan Prostate Cancer Genetics Project (PCGP).

resultsThe strongest evidence for linkage was detected at 16q23 (LOD = 2.70 at rs1079635). Prostate cancer linkage to the same region of 16q23 has been observed by others and the region contains several strong candidate genes including the known prostate cancer tumor suppressor genes ATBF1 and WWOX. This linkage signal was not detected in our prior linkage study on 175 PCGP families, illustrating the genetic heterogeneity underlying prostate cancer susceptibility.

conclusionsFurther linkage studies in combination with tumor analyses from linked families are in progress to identify the putative hereditary prostate cancer gene at 16q23.

Indexed as

AgedChromosomes, Human, Pair 16Genetic LinkageGenetic Predisposition to DiseaseGenetic TestingHomeodomain ProteinsHumansLod ScoreMaleMiddle AgedOxidoreductasesProstatic NeoplasmsTumor Suppressor ProteinsWW Domain-Containing OxidoreductaseHomeodomain ProteinsOxidoreductasesTumor Suppressor ProteinsWW Domain-Containing OxidoreductaseWWOX protein, humanZFHX3 protein, human

Identifiers

PMID19035517
PMCPMC2712837
OpenAlexW2145956972

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.