Evidence map›Paper›PMID 19034519›Full record

ArticleMolecular genetics and genomics : MGG2009

A genetic screen in Saccharomyces cerevisiae identifies new genes that interact with mex67-5, a temperature-sensitive allele of the gene encoding the mRNA export receptor.

Francisco Estruch, Lorena Peiró-Chova, Natalia Gómez-Navarro, Jordi Durbán, Christine Hodge, Marcellí Del Olmo, Charles N Cole

Abstract read
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In one paragraph

Article in Molecular genetics and genomics : MGG, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
0.8field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 15 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Protein quality control in the nucleus.Current opinion in cell biology · 2016
    Review
  5. Cellular maintenance of nuclear protein homeostasis.Cellular and molecular life sciences : CMLS · 2014
    Review
  6. Regulation of histone gene transcription in yeast.Cellular and molecular life sciences : CMLS · 2014
    Review
  7. Review
  8. Review
  9. Article
  10. Article
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 2 countries.

Francisco EstruchDepartment of Biochemistry and Molecular Biology, Universitat de Valencia, c/Dr. Moliner, 50, Burjassot (Valencia), 46100, Spain. estruch@uv.es
Lorena Peiró-Chova
Natalia Gómez-Navarro
Jordi Durbán
Christine Hodge
Marcellí Del Olmo
Charles N Cole
Universitat de València · ESDartmouth College · US

Funding

REGULATION OF THE METABOLISM OF EUCARYOTIC MRNAR01GM033998 · NIGMS · DARTMOUTH COLLEGE · PI COLE, CHARLES N. · 1985 to 2013
$6.1M
NIGMS NIH HHS GM33998NIGMS NIH HHS R01 GM033998
6 · The paper itself

Abstract

The Mex67p protein, together with Mtr2p, functions as the mRNA export receptor in Saccharomyces cerevisiae by interacting with both mRNA and nuclear pore complexes. To identify genes that interact functionally with MEX67, we used transposon insertion to search for mutations that suppressed the temperature-sensitive mex67-5 allele. Four suppressors are described here. The screen revealed that mutant Mex67-5p, but not wild-type Mex67p, is a target of the nuclear protein quality control mediated by San1p, a ubiquitin-protein ligase that participates in degradation of aberrant chromatin-associated proteins. Our finding that overexpression of the SPT6 gene alleviates the growth defects of the mex67-5 strain, together with the impairment of poly(A)(+) RNA export caused by depletion of Spt6p or the related protein Iws1p/Spn1p, supports the mechanism proposed in mammalian cells for Spt6-mediated co-transcriptional loading of mRNA export factors during transcription elongation. Finally, our results also uncovered genetic connections between Mex67p and the poly(A) nuclease complex and with components of chromatin boundary elements.

Indexed as

Genes, FungalAllelesBase SequenceChromosomal Proteins, Non-HistoneDNA, FungalExoribonucleasesGene ExpressionHistone ChaperonesModels, BiologicalMutagenesis, InsertionalMutationNuclear ProteinsNucleocytoplasmic Transport ProteinsPlasmidsRNA-Binding ProteinsRNA, FungalChromosomal Proteins, Non-HistoneDNA, FungalExoribonucleasesHistone ChaperonesMEX67 protein, S cerevisiaeNuclear ProteinsNucleocytoplasmic Transport ProteinsRNA-Binding ProteinsRNA, FungalRNA, MessengerSaccharomyces cerevisiae ProteinsSAN1 protein, S cerevisiaeSPT6 protein, S cerevisiaeTranscriptional Elongation FactorsUbiquitin-Protein LigasesYTA7 protein, S cerevisiae

Identifiers

PMID19034519
OpenAlexW2047288092

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.