Evidence map›Paper›PMID 19026789›Full record

ArticleMolecular cell2008

Comparative analysis of argonaute-dependent small RNA pathways in Drosophila.

Rui Zhou, Ikuko Hotta, Ahmet M Denli, Pengyu Hong, Norbert Perrimon, Gregory J Hannon

Abstract readComparative Study
In one paragraph

Article in Molecular cell, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 86 papers.

0numbers the graph read from it
0cells of the map it votes in
86citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

86 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
  4. Article
  5. PSMC3 promotes RNAi by maintaining AGO2 stability through USP14.Cellular & molecular biology letters · 2022
    Article
  6. Article
  7. Article
  8. Article
  9. Review
  10. Article
  11. Review
  12. Article
  13. Article
  14. Review
  15. Article
  16. Article
  17. TheCells · 2020
    Article
  18. Review
  19. Article
  20. The DDX5/Dbp2 subfamily of DEAD-box RNA helicases.Wiley interdisciplinary reviews. RNA · 2019
    Review

26 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Rui ZhouDepartment of Genetics, Harvard Medical School, Howard Hughes Medical Institute, Boston, MA 02115, USA.
Ikuko Hotta
Ahmet M Denli
Pengyu Hong
Norbert Perrimon
Gregory J Hannon

Funding

MECHANISMS OF DSRNA-INDUCED GENE SILENCINGR01GM062534 · NIGMS · COLD SPRING HARBOR LABORATORY · PI HANNON, GREGORY J · 2000 to 2012
$4.3M
Intelligent Interfaces for Interactive Analysis of High-Content Cellular ImagesR01EB007042 · NIBIB · BRANDEIS UNIVERSITY · PI HONG, PENGYU · 2007 to 2009
$519k
Howard Hughes Medical InstituteNIBIB NIH HHS R01 EB007042NIGMS NIH HHS R01 GM062534
6 · The paper itself

Abstract

The specificity of RNAi pathways is determined by several classes of small RNAs, which include siRNAs, piRNAs, endo-siRNAs, and microRNAs (miRNAs). These small RNAs are invariably incorporated into large Argonaute (Ago)-containing effector complexes known as RNA-induced silencing complexes (RISCs), which they guide to silencing targets. Both genetic and biochemical strategies have yielded conserved molecular components of small RNA biogenesis and effector machineries. However, given the complexity of these pathways, there are likely to be additional components and regulators that remain to be uncovered. We have undertaken a comparative and comprehensive RNAi screen to identify genes that impact three major Ago-dependent small RNA pathways that operate in Drosophila S2 cells. We identify subsets of candidates that act positively or negatively in siRNA, endo-siRNA, and miRNA pathways. Our studies indicate that many components are shared among all three Argonaute-dependent silencing pathways, though each is also impacted by discrete sets of genes.

Indexed as

AnimalsArgonaute ProteinsCell LineDrosophilaDrosophila melanogasterDrosophila ProteinsEukaryotic Initiation FactorsGene SilencingGenes, InsectMicroRNAsModels, BiologicalRNA-Induced Silencing ComplexRNA InterferenceRNA, Small InterferingRNA, UntranslatedAGO1 protein, DrosophilaAGO2 protein, DrosophilaArgonaute ProteinsDrosophila ProteinsEukaryotic Initiation FactorsMicroRNAsRNA-Induced Silencing ComplexRNA, Small InterferingRNA, Untranslated

Identifiers

PMID19026789
PMCPMC2615197

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.