Evidence map›Paper›PMID 19023859›Full record

ArticleDevelopmental neurobiology

Conservation and expression of IQ-domain-containing calpacitin gene products (neuromodulin/GAP-43, neurogranin/RC3) in the adult and developing oscine song control system.

David F Clayton, Julia M George, Claudio V Mello, Sandra M Siepka

Abstract read
In one paragraph

Article in Developmental neurobiology. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
0.4field-weighted citation impact, top 37% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 13 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

David F ClaytonDepartment of Cell and Developmental Biology, University of Illinois at Urbana-Champaign, Illinois 61801, USA. dclayton@uiuc.edu
Julia M George
Claudio V Mello
Sandra M Siepka
Rockefeller University · USUniversity of Illinois Urbana-Champaign · US

Funding

Gene Regulation in Auditory LearningR01DC002853 · NIDCD · OREGON HEALTH & SCIENCE UNIVERSITY · PI MELLO, CLAUDIO V · 2003 to 2007
$1.5M
Experience Dependent Changes in the BrainR01NS051820 · NINDS · UNIVERSITY OF ILLINOIS URBANA-CHAMPAIGN · PI CLAYTON, DAVID F · 2005 to 2008
$1.3M
GENE REGULATION IN AUDITORY LEARNINGR29DC002853 · NIDCD · ROCKEFELLER UNIVERSITY · PI MELLO, CLAUDIO V · 1996 to 2000
$69k
DIFFERENTIAL GENE EXPRESSION IN THE BRAINR01NS025742 · NINDS · UNIVERSITY OF ILLINOIS URBANA-CHAMPAIGN · PI CLAYTON, DAVID F · 1989 to 1995
–
NIDCD NIH HHS DC02853NIDCD NIH HHS R01 DC002853NIDCD NIH HHS R29 DC002853NINDS NIH HHS NS051820NINDS NIH HHS NS25742NINDS NIH HHS R01 NS051820
6 · The paper itself

Abstract

Songbirds are appreciated for the insights they provide into regulated neural plasticity. Here, we describe the comparative analysis and brain expression of two gene sequences encoding probable regulators of synaptic plasticity in songbirds: neuromodulin (GAP-43) and neurogranin (RC3). Both are members of the calpacitin family and share a distinctive conserved core domain that mediates interactions between calcium, calmodulin, and protein kinase C signaling pathways. Comparative sequence analysis is consistent with known phylogenetic relationships, with songbirds most closely related to chicken and progressively more distant from mammals and fish. The C-terminus of neurogranin is different in birds and mammals, and antibodies to the protein reveal high expression in adult zebra finches in cerebellar Purkinje cells, which has not been observed in other species. RNAs for both proteins are generally abundant in the telencephalon yet markedly reduced in certain nuclei of the song control system in adult canaries and zebra finches: neuromodulin RNA is very low in RA and HVC (relative to the surrounding pallial areas), whereas neurogranin RNA is conspicuously low in Area X (relative to surrounding striatum). In both cases, this selective downregulation develops in the zebra finch during the juvenile song learning period, 25-45 days after hatching. These results suggest molecular parallels to the robust stability of the adult avian song control circuit.

Indexed as

Age FactorsAnimalsAnimals, NewbornCloning, MolecularFinchesGAP-43 ProteinGene Expression Regulation, DevelopmentalHigh Vocal CenterIntracellular SpaceNeurograninRNA, MessengerSequence AnalysisVocalization, AnimalGAP-43 ProteinNeurograninRNA, Messenger

Identifiers

PMID19023859
PMCPMC4535698
OpenAlexW2042557339

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.