Evidence map›Paper›PMID 19022302›Full record

ArticleBiochimica et biophysica acta2009

HIV-1 Tat C-terminus is cleaved by calpain 1: implication for Tat-mediated neurotoxicity.

Giovanni Passiatore, Slava Rom, Davide Eletto, Francesca Peruzzi

Open access · greenAbstract read
In one paragraph

Article in Biochimica et biophysica acta, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
0.1field-weighted citation impact, top 56% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 11 citations in OpenAlex.

  1. Drug discovery today. Disease models · 2020
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Giovanni PassiatoreDepartment of Neuroscience and Center for Neurovirology, Temple University School of Medicine, 1900 North 12th Street, Philadelphia, Pennsylvania 19122, USA.
Slava Rom
Davide Eletto
Francesca Peruzzi
Temple University · US

Funding

Mechanisms involved in HIV-1 Tat mediated neuronal damageR01MH079751 · NIMH · TEMPLE UNIV OF THE COMMONWEALTH · PI PERUZZI, FRANCESCA · 2007 to 2011
$1.5M
Molecular basis of neuronal dysfunction in AIDSR01MH071162 · NIMH · TEMPLE UNIV OF THE COMMONWEALTH · PI PERUZZI, FRANCESCA · 2004 to 2008
$1.3M
NIMH NIH HHS MH071162NIMH NIH HHS MH079751NIMH NIH HHS R01 MH071162NIMH NIH HHS R01 MH079751
6 · The paper itself

Abstract

HIV-Encephalopathy (HIVE) is a common neurological disorder associated with HIV-1 infection and AIDS. The activity of the HIV trans-activating protein Tat is thought to contribute to neuronal pathogenesis. While Tat proteins from primary virus isolates consist of 101 or more amino acids, 72 and 86 amino acids forms of Tat are commonly used for in vitro studies. Although Tat72 contains the minimal domain required for viral replication, other activities of Tat appear to vary according to its length, sub-cellular localization, cell type and the stage of cellular differentiation. In this study, we investigated the stability of intracellular Tat101 during proliferation and differentiation of neuronal cells in culture. We have utilized rat neuronal progenitors as a model of neuronal cell proliferation and differentiation, as well as rat primary cortical neurons as a model of fully differentiated cells. Our results indicate that, upon internalization, Tat101 was degraded more rapidly in proliferating cells than in cells which either underwent neuronal differentiation or were fully differentiated. Intracellular degradation of Tat was prevented by the calpain 1 inhibitor, ALLN, in both proliferating and differentiated cells. Inhibition of calpain 1 by calpastatin peptide also prevented Tat cleavage. In vitro calpain digestion and mass spectrometry analysis further demonstrated that the sequence of Tat sensitive to calpain cleavage was located in the C-terminus of this viral protein, between amino acids 68 and 69. Moreover, cleavage of Tat101 by calpain 1 increased neurotoxic effect of this viral protein and presence of the calpain inhibitor protected neuronal cells from Tat-mediated toxicity.

Indexed as

Amino Acid SequenceAnimalsCalpainCell DifferentiationCell NucleusCell ProliferationCells, CulturedCerebral CortexEnzyme InhibitorsIntracellular SpaceLeupeptinsMolecular Sequence DataNeuronsProtein Processing, Post-TranslationalProtein StabilityProtein Transportacetylleucyl-leucyl-norleucinalCalpainEnzyme InhibitorsLeupeptinstat Gene Products, Human Immunodeficiency Virus

Identifiers

PMID19022302
PMCPMC2704945
OpenAlexW2157361317

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.