Evidence map›Paper›PMID 19020043›Full record

ArticleThe Journal of neuroscience : the official journal of the Society for Neuroscience2008

scn1bb, a zebrafish ortholog of SCN1B expressed in excitable and nonexcitable cells, affects motor neuron axon morphology and touch sensitivity.

Amanda J Fein, Melissa A Wright, Emily A Slat, Angeles B Ribera, Lori L Isom

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of neuroscience : the official journal of the Society for Neuroscience, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
1.2field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 23 citations in OpenAlex.

  1. Article
  2. RING finger protein 121 facilitates the degradation and membrane localization of voltage-gated sodium channels.Proceedings of the National Academy of Sciences of the United States of America · 2015
    Article
  3. Article
  4. Abnormal neuronal patterning occurs during early postnatal brain development of Scn1b-null mice and precedes hyperexcitability.Proceedings of the National Academy of Sciences of the United States of America · 2013
    Article
  5. Article
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  8. Review
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  11. Article
  12. A novel adhesion molecule in human breast cancer cells: voltage-gated Na+ channel beta1 subunit.The international journal of biochemistry & cell biology · 2009
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 2 countries.

Amanda J FeinDepartment of Pharmacology, University of Michigan, Ann Arbor, Michigan 48109-0632, USA.
Melissa A Wright
Emily A Slat
Angeles B Ribera
Lori L Isom
University of Michigan–Ann Arbor · USInstitute of Molecular Biology and Biophysics · RUUniversity of Colorado Anschutz Medical Campus · US

Funding

Medical Scientist Training ProgramT32GM008497 · NIGMS · UNIVERSITY OF COLORADO DENVER · PI WILSON, CARA C. · 1993 to 2022
$15.2M
INTERDEPARTMENTAL TRAINING IN PHARMACOLOGICAL SCIENCEST32GM007767 · NIGMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI ISOM, LORI L. · 1985 to 2019
$10.2M
ZEBRAFISH TRANSGENIC CORE - ROCKY MOUNTAIN NEUROLOGICAL DISORDERS CORE CENTERP30NS048154 · NINDS · UNIVERSITY OF COLORADO DENVER · PI RIBERA, ANGELES BADELL · 2004 to 2020
$10.1M
MOLECULAR ANALYSIS OF K+CURRENTS IN DEVELOPING NEURONSR01NS025217 · NINDS · UNIVERSITY OF COLORADO DENVER · PI RIBERA, ANGELES BADELL · 1993 to 2014
$3.9M
Sodium Channel Beta Subunit Cell Adhesive InteractionsR01MH059980 · NIMH · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI ISOM, LORI L. · 2000 to 2010
$2.7M
NEURONAL EXCITABILITY IN WILD TYPE AND MUTANT ZEBRAFISHR01NS038937 · NINDS · UNIVERSITY OF COLORADO DENVER · PI RIBERA, ANGELES BADELL · 2000 to 2010
$2.4M
BASIC NEUROSCIENCEST32NS007083 · NINDS · UNIVERSITY OF COLORADO DENVER · PI RIBERA, ANGELES BADELL · 1985 to 2011
$1.1M
Voltage-gated sodium channel beta subunits in zebrafishR21NS051747 · NINDS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI ISOM, LORI L · 2005 to 2006
$375k
Non-cell autonomous developmental effects of sodium channelsF30NS061409 · NINDS · UNIVERSITY OF COLORADO DENVER · PI WRIGHT, MELISSA A. · 2008 to 2010
$85k
Cloning and expression of sodium channel beta subunitsF31NS047901 · NINDS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI HOBSON, AMANDA J. · 2004 to 2006
$82k
NIGMS NIH HHS 5T32 GM007767NIGMS NIH HHS T32 GM007767NIGMS NIH HHS T32 GM008497NIMH NIH HHS MH059980NIMH NIH HHS R01 MH059980NINDS NIH HHS F30 NS061409NINDS NIH HHS F31 NS047901NINDS NIH HHS NS038937NINDS NIH HHS NS047901NINDS NIH HHS NS048154NINDS NIH HHS NS51747NINDS NIH HHS P30 NS048154NINDS NIH HHS R01 NS025217NINDS NIH HHS R01 NS038937NINDS NIH HHS R21 NS051747NINDS NIH HHS T32 NS007083
6 · The paper itself

Abstract

Voltage-gated Na(+) channels initiate and propagate action potentials in excitable cells. Mammalian Na(+) channels are composed of one pore-forming alpha-subunit and two beta-subunits. SCN1B encodes the Na(+) channel beta1-subunit that modulates channel gating and voltage dependence, regulates channel cell surface expression, and functions as a cell adhesion molecule (CAM). We recently identified scn1ba, a zebrafish ortholog of SCN1B. Here we report that zebrafish express a second beta1-like paralog, scn1bb. In contrast to the restricted expression of scn1ba mRNA in excitable cells, we detected scn1bb transcripts and protein in several ectodermal derivatives including neurons, glia, the lateral line, peripheral sensory structures, and tissues derived from other germ layers such as the pronephros. As expected for beta1-subunits, elimination of Scn1bb protein in vivo by morpholino knock-down reduced Na(+) current amplitudes in Rohon-Beard neurons of zebrafish embryos, consistent with effects observed in heterologous systems. Further, after Scn1bb knock-down, zebrafish embryos displayed defects in Rohon-Beard mediated touch sensitivity, demonstrating the significance of Scn1bb modulation of Na(+) current to organismal behavior. In addition to effects associated with Na(+) current modulation, Scn1bb knockdown produced phenotypes consistent with CAM functions. In particular, morpholino knock-down led to abnormal development of ventrally projecting spinal neuron axons, defasciculation of the olfactory nerve, and increased hair cell number in the inner ear. We propose that, in addition to modulation of electrical excitability, Scn1bb plays critical developmental roles by functioning as a CAM in the zebrafish embryonic nervous system.

Indexed as

Analysis of VarianceAnimalsAnimals, Genetically ModifiedAntibodies, MonoclonalAxonsBody PatterningCentral Nervous SystemEmbryo, NonmammalianEpithelial CellsGene Expression Regulation, DevelopmentalGreen Fluorescent ProteinsKidneyMotor NeuronsNeurogliaSequence AlignmentSodium ChannelsAntibodies, MonoclonalGreen Fluorescent Proteinsscn1ba protein, zebrafishSodium ChannelsTubulinVoltage-Gated Sodium Channel beta-1 SubunitZebrafish Proteins

Identifiers

PMID19020043
PMCPMC2741146
OpenAlexW2150838362

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.