Evidence map›Paper›PMID 19018947›Full record

ArticleJournal of medical primatology2009

MHC haplotype frequencies in a UK breeding colony of Mauritian cynomolgus macaques mirror those found in a distinct population from the same geographic origin.

Edward T Mee, Anjna Badhan, Julie A Karl, Roger W Wiseman, Keith Cutler, Leslie A Knapp, Neil Almond, David H O'Connor, Nicola J Rose

Open access · greenAbstract read
In one paragraph

Article in Journal of medical primatology, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 36 papers.

0numbers the graph read from it
0cells of the map it votes in
36citing papers in PubMed
1.8field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

36 citing papers in PubMed, 51 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 2 countries.

Edward T MeeDivision of Retrovirology, National Institute for Biological Standards and Control, Blanche Lane, South Mimms, Hertfordshire, UK. emee@nibsc.ac.uk
Anjna Badhan
Julie A Karl
Roger W Wiseman
Keith Cutler
Leslie A Knapp
Neil Almond
David H O'Connor
Nicola J Rose
National Institute for Biological Standards and Control · GBUniversity of Wisconsin–Madison · USUniversity of Cambridge · GB

Funding

WNPRC Supplemental Request for Nonhuman Primate Enclosures to Equip HIV/AIDS-Related Research FacilitiesP51OD011106 · OD · UNIVERSITY OF WISCONSIN-MADISON · PI Dorota A. Grejner-Brzezinska · 2012 to 2026
$150.7M
ZOLEDRONATE PREVENTS BONE LOSS IN OVARIECTOMIZED RHESUS MONKEYSP51RR000167 · NCRR · UNIVERSITY OF WISCONSIN-MADISON · PI WATKINS, DAVID I · 1985 to 2011
$106.7M
SIV-Specific CD8+ T-Cell in Mauritian Cynomolgus MacaquesR21AI068488 · NIAID · UNIVERSITY OF WISCONSIN-MADISON · PI O'CONNOR, DAVID H. · 2006 to 2007
$507k
Department of HealthMedical Research Council G0601201Medical Research Council G9025730NCRR NIH HHS P51 RR000167NIAID NIH HHS 1R21AI068488-01A2NIAID NIH HHS N01 AI040088NIAID NIH HHS R21 AI068488NIH HHS P51 OD011106
6 · The paper itself

Abstract

backgroundMauritian cynomolgus macaques have greatly restricted genetic diversity in the MHC region compared to other non-human primates; however, the frequency of common MHC haplotypes among captive-bred populations has not been reported.

methodsMicrosatellite PCR was used to determine MHC haplotype frequencies among captive macaques at a UK breeding facility. Allele-specific PCR and reference strand conformational analysis were used to determine the allele expression profile of a subset of animals.

resultsHaplotypes H3 (21%) and H1 (19%) were most common in the captive population of Mauritian cynomolgus macaques. Predicted alleles were detected by allele-specific PCR-SSP in 98% of animals. Allele expression profiles were similar in animals with identical haplotypes.

conclusionsMauritian cynomolgus macaques in the UK breeding facility have restricted MHC diversity comparable to a previously described population. Microsatellite-derived haplotypes are highly predictive of allele expression. A selective breeding program has been established to produce MHC-identical animals for biomedical research.

Indexed as

Genetics, PopulationAllelesAnimalsBreedingGene FrequencyHaplotypesMacaca fascicularisMajor Histocompatibility ComplexMauritiusMicrosatellite RepeatsSequence Analysis, DNA

Identifiers

PMID19018947
PMCPMC4509677
OpenAlexW1975563165

What OpenQuestion holds

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LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.