Evidence map›Paper›PMID 19017985›Full record

ArticleJournal of immunology (Baltimore, Md. : 1950)2008

Interaction between RANTES promoter variant and CCR5Delta32 favors recovery from hepatitis B.

Chloe L Thio, Jacquie Astemborski, Rasmi Thomas, Timothy Mosbruger, Mallory D Witt, James J Goedert, Keith Hoots, Cherie Winkler, David L Thomas, Mary Carrington

Abstract readMulticenter Study
In one paragraph

Article in Journal of immunology (Baltimore, Md. : 1950), 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.6field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 23 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Targeting CCL5 in inflammation.Expert opinion on therapeutic targets · 2013
    Review
  6. Article
  7. Chemokine (CCR) and fractalkine (CX3CR) receptors and end stage renal disease.Inflammation research : official journal of the European Histamine Research Society ... [et al.] · 2011
    Article
  8. Clinical use of CCR5 inhibitors in HIV and beyond.Journal of translational medicine · 2011
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 6 institutions in 1 country.

Chloe L ThioDepartment of Medicine, Johns Hopkins University, Baltimore, MD 21205, USA.
Jacquie Astemborski
Rasmi Thomas
Timothy Mosbruger
Mallory D Witt
James J Goedert
Keith Hoots
Cherie Winkler
David L Thomas
Mary Carrington
Johns Hopkins Medicine · USNational Cancer Institute · USJohns Hopkins University · USLos Angeles Medical Center · USScience Applications International Corporation (United States) · USThe University of Texas Health Science Center at Houston · US

Funding

NATURAL HISTORY OF AIDS IN HOMOSEXUAL MENU01AI035040 · NIAID · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI DETELS, ROGER, MARTINEZ-MAZA, OTONIEL · 1993 to 2018
$75.2M
University of Pittsburgh Multicenter AIDS Cohort Study (MACS)U01AI035041 · NIAID · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI MARTINSON, JEREMY JAMES, RINALDO, CHARLES R · 1993 to 2018
$71.4M
MULTICENTER AIDS COHORT STUDYU01AI035039 · NIAID · NORTHWESTERN UNIVERSITY AT CHICAGO · PI WOLINSKY, STEVEN M · 1993 to 2018
$66.4M
Multicenter Aids Cohort Study- Part B (Baltimore Site)U01AI035042 · NIAID · JOHNS HOPKINS UNIVERSITY · PI BROWN, TODD T, MARGOLICK, JOSEPH B. · 1993 to 2018
$61.5M
ZIPRASIDONE (GEODON) AUGMENTATION IN SEROTONIN REUPTAKE INHIBITOR-RESISTANT OBM01RR000071 · NCRR · MOUNT SINAI SCHOOL OF MEDICINE OF NYU · PI NEWCORN, JEFFREY H · 1985 to 2009
$41.5M
METHODOLOGICAL EXPERTISE IN INTREPRETING MACS DATAU01AI035043 · NIAID · JOHNS HOPKINS UNIVERSITY · PI JACOBSON, LISA P · 1993 to 2011
$26.9M
XANTHINE OXIDASE PRODUCTS IN MODULATION OF ENDOTHELIAL DYSFUNCTIONM01RR000059 · NCRR · UNIVERSITY OF IOWA · PI ASHARE, ALIX · 1985 to 2007
$22.3M
Effects of genetic polymorphism in MHC, KIR, and related loci on human diseaseZIABC010791 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI CARRINGTON, MARY N. · 2009 to 2025
$18.2M
VENOGLOBULIN-I IN THE TREATMENT OF SEVERE STEROID DEPENDENT ASTHMAM01RR006020 · NCRR · WEILL MEDICAL COLLEGE OF CORNELL UNIV · PI GOTTO, ANTONIO M · 1990 to 2003
$11.7M
Zolmitriptan challenge and human performance testingM01RR002558 · NCRR · UNIVERSITY OF TEXAS HLTH SCI CTR HOUSTON · PI SCHULTZ, STANLEY G · 1985 to 2006
$10.3M
Identification of Genetic Factors Associated with Infectious DiseasesZIABC010297 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI WINKLER, CHERYL · 2009 to 2022
$6.3M
MULTICENTER AIDS COHORT STUDY PATHOGENESIS RESEARCH LABSU01AI037613 · NIAID · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI JAMIESON-KARAVODIN, BETH DEIRDRE · 1995 to 2003
$3.4M
Intramural NIH HHS Z01 DA000441NCI NIH HHS N01 CO012400NCI NIH HHS N01-CO-12400NCI NIH HHS N02 CP055504NCRR NIH HHS 5-MO1-RR-00722NCRR NIH HHS M01 RR000059NCRR NIH HHS M01 RR000071NCRR NIH HHS M01 RR000722NCRR NIH HHS M01 RR002558NCRR NIH HHS MO1-RR00059NCRR NIH HHS MO1-RR00071NCRR NIH HHS MO1-RR02558NCRR NIH HHS MO1-RR06020NIAID NIH HHS U01 AI035039NIAID NIH HHS U01 AI035040NIAID NIH HHS U01 AI035041NIAID NIH HHS U01 AI035042NIAID NIH HHS U01 AI035043NIAID NIH HHS U01 AI037613NIAID NIH HHS U01 AI037984NIAID NIH HHS UO1-AI-35039NIAID NIH HHS UO1-AI-35040NIAID NIH HHS UO1-AI-35041NIAID NIH HHS UO1-AI-35042NIAID NIH HHS UO1-AI-35043NIAID NIH HHS UO1-AI-37613NIAID NIH HHS UO1-AI-37984NICHD NIH HHS 01-HD-4-1224NICHD NIH HHS N01-HD-4-3200NIDA NIH HHS DA00441NIDA NIH HHS K08 DA000441
6 · The paper itself

Abstract

Recovery from acute hepatitis B virus (HBV) infection occurs in 95% of adult-acquired infections. A 32-bp deletion in CCR5 (CCR5Delta32), which encodes for a nonfunctional receptor, increases the likelihood of recovery. Using 181 subjects with persistent HBV infection and 316 who had recovered, we tested the hypothesis that an epistatic interaction between functional polymorphisms in RANTES (a CCR5 ligand) and CCR5 impacts recovery. Specific models designed to assess individual contributions of compound genotypes demonstrated that the only combination associated with recovery from an HBV infection was RANTES -403A with CCR5Delta32 (odds ratio 0.36, p = 0.02). Because the phenotypic consequence of -403A is reported to be higher levels of RANTES, we propose a model in which excess RANTES in combination with low CCR5 favors recovery from an HBV infection, which will require validation through functional testing.

Indexed as

Models, GeneticAcute DiseaseAdolescentAdultBase SequenceChemokine CCL5ChildChild, PreschoolCohort StudiesEpistasis, GeneticFemaleHepatitis BHepatitis B virusHumansMalePromoter Regions, GeneticCCL5 protein, humanChemokine CCL5Receptors, CCR5

Identifiers

PMID19017985
PMCPMC2650505
OpenAlexW2142212320

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.