Evidence map›Paper›PMID 19015549›Full record

ArticleGenetics2009

The Caenorhabditis elegans ing-3 gene regulates ionizing radiation-induced germ-cell apoptosis in a p53-associated pathway.

Jingjing Luo, Sitar Shah, Karl Riabowol, Paul E Mains

Abstract readComparative Study
In one paragraph

Article in Genetics, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed.

  1. Article
  2. Overexpression ofExperimental and therapeutic medicine · 2021
    Article
  3. Review
  4. Review
  5. Article
  6. INGs are potential drug targets for cancer.Journal of cancer research and clinical oncology · 2017
    Review
  7. Article
  8. Article
  9. Article
  10. Phylogeny and function of the invertebrate p53 superfamily.Cold Spring Harbor perspectives in biology · 2010
    Review
  11. Inhibitor of growth tumor suppressors in cancer progression.Cellular and molecular life sciences : CMLS · 2010
    Review
  12. Cancer models in Caenorhabditis elegans.Developmental dynamics : an official publication of the American Association of Anatomists · 2010
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Jingjing LuoGenes and Development Research Group, University of Calgary, Calgary, Alberta T2N 4N1, Canada.
Sitar Shah
Karl Riabowol
Paul E Mains

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The inhibitor of growth (ING) family of type II tumor suppressors are encoded by five genes in mammals and by three genes in Caenorhabditis elegans. All ING proteins contain a highly conserved plant homeodomain (PHD) zinc finger. ING proteins are activated by stresses, including ionizing radiation, leading to the activation of p53. ING proteins in mammals and yeast have recently been shown to read the histone code in a methylation-sensitive manner to regulate gene expression. Here we identify and characterize ing-3, the C. elegans gene with the highest sequence identity to the human ING3 gene. ING-3 colocalizes with chromatin in embryos, the germline, and somatic cells. The ing-3 gene is part of an operon but is also transcribed from its own promoter. Both ing-3(RNAi) and ing-3 mutant strains demonstrate that the gene likely functions in concert with the C. elegans p53 homolog, cep-1, to induce germ-cell apoptosis in response to ionizing radiation. Somatically, the ing-3 mutant has a weak kinker uncoordinated (kinker Unc) phenotype, indicating a possible neuronal function.

Indexed as

Genes, HelminthGenes, Tumor SuppressorAnimalsAnimals, Genetically ModifiedApoptosisBase SequenceCaenorhabditis elegansCaenorhabditis elegans ProteinsDNA, HelminthDNA PrimersGene ExpressionGerm CellsHomeodomain ProteinsHumansImmunohistochemistryMutationCaenorhabditis elegans ProteinsCEP-1 protein, C elegansDNA, HelminthDNA PrimersHomeodomain ProteinsING3 protein, humanTrans-ActivatorsTumor Suppressor Protein p53Tumor Suppressor Proteins

Identifiers

PMID19015549
PMCPMC2644941

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.