Evidence map›Paper›PMID 19015515›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2008

Connecting actin monomers by iso-peptide bond is a toxicity mechanism of the Vibrio cholerae MARTX toxin.

Dmitri S Kudryashov, Zeynep A Oztug Durer, A Jimmy Ytterberg, Michael R Sawaya, Inna Pashkov, Katerina Prochazkova, Todd O Yeates, Rachel R Ogorzalek Loo, Joseph A Loo, Karla J Fullner Satchell and 1 more

Open access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 49 papers.

0numbers the graph read from it
0cells of the map it votes in
49citing papers in PubMed
4.3field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

49 citing papers in PubMed, 74 citations in OpenAlex.

  1. Effects of Bile on PathogenicBiomolecules · 2025
    Article
  2. Article
  3. Review
  4. Article
  5. Antagonistic effects of actin-specific toxins onbioRxiv : the preprint server for biology · 2024
    Article
  6. Chemical Proteomics Reveals NMolecular & cellular proteomics : MCP · 2024
    Article
  7. Article
  8. Article
  9. Article
  10. Posttranslational modifications of the cytoskeleton.Cytoskeleton (Hoboken, N.J.) · 2021
    Review
  11. International journal of molecular sciences · 2021
    Article
  12. Unravelling the Biological Activities of theMolecules (Basel, Switzerland) · 2020
    Article
  13. Article
  14. Virulence Regulation and Innate Host Response in the Pathogenicity ofFrontiers in cellular and infection microbiology · 2020
    Review
  15. Article
  16. Emerging microbes & infections · 2019
    Article
  17. Review
  18. Article
  19. Article
  20. Accessory Toxins ofFrontiers in microbiology · 2018
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 1 country.

Dmitri S KudryashovDepartment of Chemistry and Biochemistry and Molecular Biology Institute, University of California, Los Angeles, CA 90095, USA.
Zeynep A Oztug Durer
A Jimmy Ytterberg
Michael R Sawaya
Inna Pashkov
Katerina Prochazkova
Todd O Yeates
Rachel R Ogorzalek Loo
Joseph A Loo
Karla J Fullner Satchell
Emil Reisler
University of California, Los Angeles · USNorthwestern University · US

Funding

Dynamic Events in Myosin and Actin and Their FunctionR01GM077190 · NIGMS · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI REISLER, EMIL · 2006 to 2020
$6.2M
Genetic and biochemical study ov V. cholerase RTX toxinR01AI051490 · NIAID · NORTHWESTERN UNIVERSITY AT CHICAGO · PI SATCHELL, KARLA J F · 2003 to 2012
$3.3M
Mass Spectrometry of Protein AssembliesR01RR020004 · NCRR · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI LOO, JOSEPH A · 2004 to 2011
$2.7M
High Resolution Hybrid FT-ICR Mass SpectrometerS10RR023045 · NCRR · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI LOO, JOSEPH A · 2006 to 2006
$1.2M
NCRR NIH HHS R01 RR020004NCRR NIH HHS RR020004NCRR NIH HHS S10 RR023045NIAID NIH HHS AI051490NIAID NIH HHS R01 AI051490NIGMS NIH HHS GM077190NIGMS NIH HHS R01 GM077190
6 · The paper itself

Abstract

The Gram-negative bacterium Vibrio cholerae is the causative agent of a severe diarrheal disease that afflicts three to five million persons annually, causing up to 200,000 deaths. Nearly all V. cholerae strains produce a large multifunctional-autoprocessing RTX toxin (MARTX(Vc)), which contributes significantly to the pathogenesis of cholera in model systems. The actin cross-linking domain (ACD) of MARTX(Vc) directly catalyzes a covalent cross-linking of monomeric G-actin into oligomeric chains and causes cell rounding, but the nature of the cross-linked bond and the mechanism of the actin cytoskeleton disruption remained elusive. To elucidate the mechanism of ACD action and effect on actin, we identified the covalent cross-link bond between actin protomers using limited proteolysis, X-ray crystallography, and mass spectrometry. We report here that ACD catalyzes the formation of an intermolecular iso-peptide bond between residues E270 and K50 located in the hydrophobic and the DNaseI-binding loops of actin, respectively. Mutagenesis studies confirm that no other residues on actin can be cross-linked by ACD both in vitro and in vivo. This cross-linking locks actin protomers into an orientation different from that of F-actin, resulting in strong inhibition of actin polymerization. This report describes a microbial toxin mechanism acting via iso-peptide bond cross-linking between host proteins and is, to the best of our knowledge, the only known example of a peptide linkage between nonterminal glutamate and lysine side chains.

Indexed as

ActinsAnimalsBacterial ToxinsCrystallography, X-RayElectrophoresis, Polyacrylamide GelHydrolysisMass SpectrometryModels, MolecularPeptidesRabbitsSpectrometry, FluorescenceVibrio choleraeActinsBacterial ToxinsPeptides

Identifiers

PMID19015515
PMCPMC2587553
OpenAlexW2100188178

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.