ArticleNucleic acids research2009
Génolevures: protein families and synteny among complete hemiascomycetous yeast proteomes and genomes.
Article in Nucleic acids research, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 47 papers.
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Who cites it
47 citing papers in PubMed.
- Synthetic biology tools for engineering Yarrowia lipolytica.Biotechnology advances · 2018Review
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- Inferring duplication episodes from unrooted gene trees.BMC genomics · 2018Article
- Binding interface change and cryptic variation in the evolution of protein-protein interactions.BMC evolutionary biology · 2016Article
- Genomic duplication problems for unrooted gene trees.BMC genomics · 2016Article
- Yeast Interspecies Comparative Proteomics Reveals Divergence in Expression Profiles and Provides Insights into Proteome Resource Allocation and Evolutionary Roles of Gene Duplication.Molecular & cellular proteomics : MCP · 2016Article
- Independent Evolution of Winner Traits without Whole Genome Duplication in Dekkera Yeasts.PloS one · 2016Article
- Optimization of lipid production with a genome-scale model of Yarrowia lipolytica.BMC systems biology · 2015Article
- Accessory NUMM (NDUFS6) subunit harbors a Zn-binding site and is essential for biogenesis of mitochondrial complex I.Proceedings of the National Academy of Sciences of the United States of America · 2015Article
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- Co-Inheritance Analysis within the Domains of Life Substantially Improves Network Inference by Phylogenetic Profiling.PloS one · 2015Article
- Screening of high-level 4-hydroxy-2 (or 5)-ethyl-5 (or 2)-methyl-3(2H)-furanone-producing strains from a collection of gene deletion mutants of Saccharomyces cerevisiae.Applied and environmental microbiology · 2015Article
- Molecular dissection of the genetic mechanisms that underlie expression conservation in orthologous yeast ribosomal promoters.Genome research · 2014Article
- Conservation and divergence of transcriptional coregulations between box C/D snoRNA and ribosomal protein genes in Ascomycota.RNA (New York, N.Y.) · 2014Article
- Universal pacemaker of genome evolution in animals and fungi and variation of evolutionary rates in diverse organisms.Genome biology and evolution · 2014Article
- Article
- The complete genome of Blastobotrys (Arxula) adeninivorans LS3 - a yeast of biotechnological interest.Biotechnology for biofuels · 2014Article
- The drug:H⁺ antiporters of family 2 (DHA2), siderophore transporters (ARN) and glutathione:H⁺ antiporters (GEX) have a common evolutionary origin in hemiascomycete yeasts.BMC genomics · 2013Article
- Replisome stall events have shaped the distribution of replication origins in the genomes of yeasts.Nucleic acids research · 2013Article
- Adaptation of the osmotolerant yeast Zygosaccharomyces rouxii to an osmotic environment through copy number amplification of FLO11D.Genetics · 2013Article
Corrections and comments
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Authors and funding
7 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
The Génolevures online database (http://cbi.labri.fr/Genolevures/ and http://genolevures.org/) provides exploratory tools and curated data sets relative to nine complete and seven partial genome sequences determined and manually annotated by the Génolevures Consortium, to facilitate comparative genomic studies of Hemiascomycete yeasts. The 2008 update to the Génolevures database provides four new genomes in complete (subtelomere to subtelomere) chromosome sequences, 50,000 protein-coding and tRNA genes, and in silico analyses for each gene element. A key element is a novel classification of conserved multi-species protein families and their use in detecting synteny, gene fusions and other aspects of genome remodeling in evolution. Our purpose is to release high-quality curated data from complete genomes, with a focus on the relations between genes, genomes and proteins.
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.