ArticleBMC genomics2008
Transcriptome analysis identifies novel responses and potential regulatory genes involved in seasonal dormancy transitions of leafy spurge (Euphorbia esula L.).
Article in BMC genomics, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 104 papers, 1 of them a synthesis that pooled it.
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Who cites it
104 citing papers in PubMed, 1 synthesis or guideline pooled it, 208 citations in OpenAlex.
- Meta-analysis of RNA-Seq studies reveals genes with dominant functions during flower bud endo- to eco-dormancy transition in Prunus species.Scientific reports · 2021Pooled it
- Metabolomic Analysis Provides Insights into Bud Paradormancy inInternational journal of molecular sciences · 2025Article
- MIKC-Type MADS-Box Gene Analysis Reveals the Role ofPlants (Basel, Switzerland) · 2025Article
- Altered expression of a raspberry homologue of VRN1 is associated with disruption of dormancy induction and misregulation of subsets of dormancy-associated genes.Journal of experimental botany · 2024Article
- MIKC type MADS-box transcription factor LcSVP2 is involved in dormancy regulation of the terminal buds in evergreen perennial litchi (Horticulture research · 2024Article
- Interaction of Phytohormones and External Environmental Factors in the Regulation of the Bud Dormancy in Woody Plants.International journal of molecular sciences · 2023Review
- Evidence of chromatin and transcriptional dynamics for cold development in peach flower bud.The New phytologist · 2022Article
- Review
- Regulation of the Bud Dormancy Development and Release in Micropropagated Rhubarb 'Malinowy'.International journal of molecular sciences · 2022Article
- Article
- The Perennial Clock Is an Essential Timer for Seasonal Growth Events and Cold Hardiness.Methods in molecular biology (Clifton, N.J.) · 2022Article
- Genetic insights into the regulatory pathways for continuous flowering in a unique orchid Arundina graminifolia.BMC plant biology · 2021Article
- Transcriptional Cascade in the Regulation of Flowering in the Bamboo OrchidBiomolecules · 2021Article
- Integrative Analysis of Gene Expression and miRNAs Reveal Biological Pathways Associated with Bud Paradormancy and Endodormancy in Grapevine.Plants (Basel, Switzerland) · 2021Article
- Article
- Comparative Study on Physiological Responses and Gene Expression of Bud Endodormancy Release Between Two Herbaceous Peony Cultivars (Frontiers in plant science · 2021Article
- Photoperiod Control of Plant Growth: Flowering Time Genes Beyond Flowering.Frontiers in plant science · 2021Review
- EARLY BUD BREAK 1 triggers bud break in peach trees by regulating hormone metabolism, the cell cycle, and cell wall modifications.Journal of experimental botany · 2020Article
- Structure and Expression of BudFrontiers in plant science · 2020Article
- Dormant but Active: Chilling Accumulation Modulates the Epigenome and Transcriptome ofFrontiers in plant science · 2020Article
44 more citing papers are in PubMed but not listed here.
Corrections and comments
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Authors and funding
5 authors at 3 institutions in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
backgroundDormancy of buds is a critical developmental process that allows perennial plants to survive extreme seasonal variations in climate. Dormancy transitions in underground crown buds of the model herbaceous perennial weed leafy spurge were investigated using a 23 K element cDNA microarray. These data represent the first large-scale transcriptome analysis of dormancy in underground buds of an herbaceous perennial species. Crown buds collected monthly from August through December, over a five year period, were used to monitor the changes in the transcriptome during dormancy transitions.
resultsNearly 1,000 genes were differentially-expressed through seasonal dormancy transitions. Expected patterns of gene expression were observed for previously characterized genes and physiological processes indicated that resolution in our analysis was sufficient for identifying shifts in global gene expression.
conclusionGene ontology of differentially-expressed genes suggests dormancy transitions require specific alterations in transport functions (including induction of a series of mitochondrial substrate carriers, and sugar transporters), ethylene, jasmonic acid, auxin, gibberellic acid, and abscisic acid responses, and responses to stress (primarily oxidative and cold/drought). Comparison to other dormancy microarray studies indicated that nearly half of the genes identified in our study were also differentially expressed in at least two other plant species during dormancy transitions. This comparison allowed us to identify a particular MADS-box transcription factor related to the DORMANCY ASSOCIATED MADS-BOX genes from peach and hypothesize that it may play a direct role in dormancy induction and maintenance through regulation of FLOWERING LOCUS T.
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