Evidence map›Paper›PMID 19012738›Full record

ArticleJournal of neurochemistry2009

Odorant receptor (OR) gene choice is biased and non-clonal in two olfactory placode cell lines, and OR RNA is nuclear prior to differentiation of these lines.

Nidhi Pathak, Paul Johnson, Michael Getman, Robert P Lane

Open access · greenAbstract read
In one paragraph

Article in Journal of neurochemistry, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
0.3field-weighted citation impact, top 48% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 15 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Nidhi PathakDepartment of Molecular Biology and Biochemistry, Wesleyan University, Middletown, CT 06459, USA.
Paul Johnson
Michael Getman
Robert P Lane
Wesleyan University · US

Funding

Pheromone Receptor Genomic Evolution and Gene RegulationR01DC006267 · NIDCD · WESLEYAN UNIVERSITY · PI LANE, ROBERT P. · 2003 to 2014
$3.6M
NIDCD NIH HHS R01 DC 006267NIDCD NIH HHS R01 DC006267
6 · The paper itself

Abstract

We have investigated two clonal mouse olfactory placode (OP) cell lines as a model system for studying endogenous odorant receptor (OR) regulation. Both lines can be differentiated into bipolar neurons with transcriptional profiles consistent with mature sensory neurons. We show that single cells exhibit monogenic OR expression like sensory neurons in vivo. Monogenic OR expression is established in undifferentiated cells and persists through differentiation, but OR gene choice is not a clonal property of either cell line. Interestingly, OR RNA shifts from predominantly nuclear to cytoplasma during differentiation of both cell lines. Finally, our data indicate that a restricted subset of OR genes and OR clusters are over-represented in cell populations, suggesting either a pre-existing intrinsic bias in OP founder cells or extrinsic influences arising from culture conditions.

Indexed as

ActinsAnimalsBiological TransportCell DifferentiationCell LineCell NucleusEmbryo, NonmammalianGAP-43 ProteinGene Expression Regulation, DevelopmentalGTP-Binding ProteinsMiceOlfactory Marker ProteinOlfactory MucosaOlfactory Receptor NeuronsReceptors, OdorantRNA, MessengerActinsGAP-43 ProteinGTP-Binding ProteinsOlfactory Marker ProteinOmp protein, mouseReceptors, OdorantRNA, Messenger

Identifiers

PMID19012738
PMCPMC2737357
OpenAlexW2093061360

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.