Evidence map›Paper›PMID 19008222›Full record

ArticleThe Journal of biological chemistry2009

Structural insights into Ca2+-dependent regulation of inositol 1,4,5-trisphosphate receptors by CaBP1.

Congmin Li, Jenny Chan, Franciose Haeseleer, Katsuhiko Mikoshiba, Krzysztof Palczewski, Mitsuhiko Ikura, James B Ames

Abstract read
In one paragraph

Article in The Journal of biological chemistry, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 41 papers.

0numbers the graph read from it
0cells of the map it votes in
41citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

41 citing papers in PubMed.

  1. Molecular basis for a CaThe Journal of biological chemistry · 2026
    Article
  2. Article
  3. Review
  4. Review
  5. Caldendrin Is a Repressor of PIEZO2 Channels and Touch Sensation in Mice.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2024
    Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Calcium Sensors in Neuronal Function and Dysfunction.Cold Spring Harbor perspectives in biology · 2019
    Review
  12. Structure and Function of IPCold Spring Harbor perspectives in biology · 2019
    Review
  13. Review
  14. Dimerization of Neuronal Calcium Sensor Proteins.Frontiers in molecular neuroscience · 2018
    Review
  15. Article
  16. Decalmodulation of Cav1 channels by CaBPs.Channels (Austin, Tex.) · 2016
    Review
  17. Sense and specificity in neuronal calcium signalling.Biochimica et biophysica acta · 2015
    Review
  18. Review
  19. Article
  20. Chemistry and biology of the initial steps in vision: the Friedenwald lecture.Investigative ophthalmology & visual science · 2014
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Congmin LiDepartment of Chemistry, University of California, Davis, California 95616, USA.
Jenny Chan
Franciose Haeseleer
Katsuhiko Mikoshiba
Krzysztof Palczewski
Mitsuhiko Ikura
James B Ames

Funding

MEMBRANE TARGETING CALCIUM SENSORS IN VISIONR01EY012347 · NEI · UNIVERSITY OF MD BIOTECHNOLOGY INSTITUTE · PI AMES, JAMES B · 1999 to 2023
$6.9M
Structure and Function of Neuronal Calcium Binding Proteins (CaBPs)R01NS059969 · NINDS · UNIVERSITY OF CALIFORNIA AT DAVIS · PI AMES, JAMES B · 2008 to 2011
$895k
Structure of DREAM a Calcium Sensor in Pain ControlR01NS045909 · NINDS · UNIVERSITY OF MD BIOTECHNOLOGY INSTITUTE · PI AMES, JAMES B · 2004 to 2007
$836k
ACQUISITION OF 500 MHZ NMR SPECTROMETERS10RR011973 · NCRR · UNIVERSITY OF CALIFORNIA DAVIS · PI LA MAR, GERD N · 1997 to 1997
–
NCRR NIH HHS RR11973NEI NIH HHS EY012347NINDS NIH HHS NS045909NINDS NIH HHS R01 NS059969
6 · The paper itself

Abstract

Calcium-binding protein 1 (CaBP1), a neuron-specific member of the calmodulin (CaM) superfamily, modulates Ca2+-dependent activity of inositol 1,4,5-trisphosphate receptors (InsP3Rs). Here we present NMR structures of CaBP1 in both Mg2+-bound and Ca2+-bound states and their structural interaction with InsP3Rs. CaBP1 contains four EF-hands in two separate domains. The N-domain consists of EF1 and EF2 in a closed conformation with Mg2+ bound at EF1. The C-domain binds Ca2+ at EF3 and EF4, and exhibits a Ca2+-induced closed to open transition like that of CaM. The Ca2+-bound C-domain contains exposed hydrophobic residues (Leu132, His134, Ile141, Ile144, and Val148) that may account for selective binding to InsP3Rs. Isothermal titration calorimetry analysis reveals a Ca2+-induced binding of the CaBP1 C-domain to the N-terminal region of InsP3R (residues 1-587), whereas CaM and the CaBP1 N-domain did not show appreciable binding. CaBP1 binding to InsP3Rs requires both the suppressor and ligand-binding core domains, but has no effect on InsP3 binding to the receptor. We propose that CaBP1 may regulate Ca2+-dependent activity of InsP3Rs by promoting structural contacts between the suppressor and core domains.

Indexed as

Amino Acid SequenceCalciumCalcium-Binding ProteinsCalmodulinCytosolEF Hand MotifsHumansInositol 1,4,5-Trisphosphate ReceptorsMagnesiumModels, MolecularMolecular Sequence DataNuclear Magnetic Resonance, BiomolecularProtein MultimerizationProtein Structure, QuaternaryProtein Structure, TertiarySequence AlignmentCa2+-binding protein-1CalciumCalcium-Binding ProteinsCalmodulinInositol 1,4,5-Trisphosphate ReceptorsMagnesium

Identifiers

PMID19008222
PMCPMC2629100

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.