Evidence map›Paper›PMID 19005571›Full record

ArticlePloS one2008

SGNP: an essential Stress Granule/Nucleolar Protein potentially involved in 5.8s rRNA processing/transport.

Chun-Hong Zhu, Jinyong Kim, Jerry W Shay, Woodring E Wright

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed, 1 pooled it
0.3field-weighted citation impact, top 39% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 1 synthesis or guideline pooled it, 37 citations in OpenAlex.

  1. Pooled it
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  14. miR-1269a and miR-1269b: Emerging Carcinogenic Genes of the miR-1269 Family.Frontiers in cell and developmental biology · 2022
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Chun-Hong ZhuDepartment of Cell Biology, University of Texas Southwestern Medical Center, Dallas, TX, USA.
Jinyong Kim
Jerry W Shay
Woodring E Wright
The University of Texas Southwestern Medical Center · US

Funding

MECHANISMS OF CELLULAR IMMORTALIZATIONR01AG007992 · NIA · UT SOUTHWESTERN MEDICAL CENTER · PI WRIGHT, WOODRING ERIK · 1989 to 2010
$3.3M
NIA NIH HHS AG07992NIA NIH HHS R01 AG007992
6 · The paper itself

Abstract

backgroundStress Granules (SG) are sites of accumulation of stalled initiation complexes that are induced following a variety of cellular insults. In a genetic screen for factors involved in protecting human myoblasts from acute oxidative stress, we identified a gene encoding a protein we designate SGNP (Stress Granule and Nucleolar Protein). METHODOLOGY/PRINCIPAL

findingsA gene-trap insertional mutagenesis screen produced one insertion that conferred resistance to sodium arsenite. RT-PCR/3' RACE was used to identify the endogenous gene expressed as a GFP-fusion transcript. SGNP is localized in both the cytoplasm and nucleolus and defines a non-nucleolar compartment containing 5.8S rRNA, a component of the 60S ribosomal subunit. Under oxidative stress, SGNP nucleolar localization decreases and it rapidly co-localizes with stress granules. The decrease in nucleolar SGNP following oxidative stress was accompanied by a large increase in nucleolar 5.8S rRNA. Knockdown of SGNP with shRNA increased global mRNA translation but induced growth arrest and cell death.

conclusionsThese results suggest that SGNP is an essential gene that may be involved in ribosomal biogenesis and translational control in response to oxidative stress.

Indexed as

Cell NucleolusActive Transport, Cell NucleusAnimalsAntibodies, MonoclonalApoptosisArsenitesBiological TransportGene Expression RegulationHeat-Shock ProteinsHumansMutagenesis, InsertionalMutationMyoblasts, SkeletalNuclear ProteinsOxidantsOxidative StressAntibodies, MonoclonalArsenitesHeat-Shock ProteinsNuclear ProteinsOxidantsRNA, Ribosomalsodium arseniteSodium Compounds

Identifiers

PMID19005571
PMCPMC2579992
OpenAlexW2149517210

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.